Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_H23
         (886 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    44   1e-04
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    44   1e-04
AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical ...    29   4.4  
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ...    29   4.4  
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ...    29   4.4  

>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
 Frame = +3

Query: 270 AGAQSKEEIREILGGGEAQES--SHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF 443
           A  ++++EIR+ L  G   E    H   +            + VAN I+    + +   +
Sbjct: 52  AKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLY 111

Query: 444 -SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSEDXIDPATAVAMFXVI 620
            +    L+ +    +NF   + +A+ IN +  E T+GHIK  ++ D I       +    
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAF 171

Query: 621 FFQGXLGT-FRSTXVXQKXKISTSMKKR 701
           +F+    T F+     ++   S+   KR
Sbjct: 172 YFKANWQTKFKKESTYKREFFSSENSKR 199


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
 Frame = +3

Query: 270 AGAQSKEEIREILGGGEAQES--SHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF 443
           A  ++++EIR+ L  G   E    H   +            + VAN I+    + +   +
Sbjct: 52  AKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLY 111

Query: 444 -SRTANLFRSEVDNINFSAPKNAADIINRWADEQTQGHIKTPVSEDXIDPATAVAMFXVI 620
            +    L+ +    +NF   + +A+ IN +  E T+GHIK  ++ D I       +    
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAF 171

Query: 621 FFQGXLGT-FRSTXVXQKXKISTSMKKR 701
           +F+    T F+     ++   S+   KR
Sbjct: 172 YFKANWQTKFKKESTYKREFFSSENSKR 199


>AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical
           protein Y87G2A.3 protein.
          Length = 493

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/100 (19%), Positives = 41/100 (41%)
 Frame = +3

Query: 312 GGEAQESSHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNINF 491
           GG    + +  G+   +    DP +     +   +  Y   D+ + T ++  S ++ +  
Sbjct: 304 GGRPNHALYFVGMSGSKLFYLDPHYCRPKTES-TAKMYAEKDSTATTDDVGFSHLEEL-V 361

Query: 492 SAPKNAADIINRWADEQTQGHIKTPVSEDXIDPATAVAMF 611
             P   AD+  +  D      +   +  + +DP+ A+AMF
Sbjct: 362 PLPSQTADVYTKMDDSTYHCQMMLWIEYENVDPSLALAMF 401


>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
           protein C36B7.5b protein.
          Length = 1148

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 624 FQGXLGTFRSTXVXQKXKISTSMKKRPSRSR 716
           F+G  G+F +T   Q+ + S +  +RPS SR
Sbjct: 901 FRGRTGSFYNTAAPQRDRTSYNSNRRPSHSR 931


>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
           protein C36B7.5a protein.
          Length = 1121

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 624 FQGXLGTFRSTXVXQKXKISTSMKKRPSRSR 716
           F+G  G+F +T   Q+ + S +  +RPS SR
Sbjct: 901 FRGRTGSFYNTAAPQRDRTSYNSNRRPSHSR 931


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,393,624
Number of Sequences: 27780
Number of extensions: 359592
Number of successful extensions: 821
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)