BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_H21
(931 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 29 0.079
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 24 2.3
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 24 2.3
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 24 2.3
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 6.9
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 9.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 9.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 9.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 9.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 9.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 9.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 9.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 9.1
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 9.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 9.1
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 9.1
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 28.7 bits (61), Expect = 0.079
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 645 APPPLXXXXKXPRXXSQVAPPRPGXXNXPGXXPPGXXPPLRP 770
AP P + P+ + +PP P PG PPG P P
Sbjct: 20 APGPQPSPHQSPQAPQRGSPPNPSQGPPPG-GPPGAPPSQNP 60
Score = 28.7 bits (61), Expect = 0.079
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 730 PGXXPXXXPPPXAPPXSXPPAAXPGIPXXALXPPXGKXGAPFXPXPXPGXVXPXXG 897
PG P P AP PP G PP G GAP P + P G
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQG------PPPGGPPGAPPSQNPSQMMISPASG 70
Score = 26.2 bits (55), Expect = 0.42
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +2
Query: 761 PXPXLXPHPRPPXPXSPXPPXPPXXXRXGPPSXLXP 868
P P PH P P PP P G P P
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.8 bits (49), Expect = 2.3
Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = +2
Query: 707 PXRXXKXXRXXPPXXXPPPX-PXLXPHPRPPXP 802
P R + R P P P P PRPP P
Sbjct: 25 PTRPTRLRREAKPEAEPGNNRPVYIPQPRPPHP 57
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 23.8 bits (49), Expect = 2.3
Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = +2
Query: 707 PXRXXKXXRXXPPXXXPPPX-PXLXPHPRPPXP 802
P R + R P P P P PRPP P
Sbjct: 26 PTRPTRLRREAEPEAEPGNNRPVYIPQPRPPHP 58
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.8 bits (49), Expect = 2.3
Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = +2
Query: 707 PXRXXKXXRXXPPXXXPPPX-PXLXPHPRPPXP 802
P R + R P P P P PRPP P
Sbjct: 26 PTRPARLRREAKPEAEPGNNRPIYIPQPRPPHP 58
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.2 bits (45), Expect = 6.9
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -3
Query: 809 GXPGXAAGGXEXGGAXGGGXXXGXXPG 729
G PG ++ G GA GG G G
Sbjct: 20 GGPGSSSAGGVVTGASGGSIVVGANNG 46
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 97 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 97 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 97 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 97 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 97 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 97 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 97 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 792 GRGXGXRXGXGGGXXXGG 739
GRG G G GG GG
Sbjct: 79 GRGKGRGHGKGGSRGRGG 96
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 346 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 346 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 346 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 346 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 346 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 346 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 345 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 394
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 330 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 379
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 13/50 (26%), Positives = 15/50 (30%)
Frame = +2
Query: 644 GSXPPXRXSQXSXXXVPGGATPXRXXKXXRXXPPXXXPPPXPXLXPHPRP 793
G+ PP + G R PP PP L P P P
Sbjct: 346 GNFPPRPIMVRPWVPMRGQVPGSRHIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2
Query: 815 PPXPPXXXRXGPPSXLXPPP 874
PP PP R P L P P
Sbjct: 638 PPLPPKRIRKMPSMPLLPRP 657
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,721
Number of Sequences: 438
Number of extensions: 5651
Number of successful extensions: 54
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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