Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_H17
(885 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein. 33 1.0
DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein. 33 1.0
BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1 (D... 33 1.0
AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein. 33 1.0
AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein. 33 1.0
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 33 1.0
AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant pr... 33 1.0
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 31 4.2
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 31 4.2
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 31 4.2
AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant pr... 31 4.2
>DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein.
Length = 1262
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = +3
Query: 717 PXFPPXKXPPXPPLXPXLPLXXILXPXFPLXXGGPFXNPXXXFPXXGXXPXPPXG 881
P P P PP P LP + P P GGP P FP P PP G
Sbjct: 682 PPLPGSAGIPPPP--PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG 734
>DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein.
Length = 229
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = +3
Query: 717 PXFPPXKXPPXPPLXPXLPLXXILXPXFPLXXGGPFXNPXXXFPXXGXXPXPPXG 881
P P P PP P LP + P P GGP P FP P PP G
Sbjct: 76 PPLPGSAGIPPPP--PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG 128
>BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1
(Drosophila) protein.
Length = 1262
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = +3
Query: 717 PXFPPXKXPPXPPLXPXLPLXXILXPXFPLXXGGPFXNPXXXFPXXGXXPXPPXG 881
P P P PP P LP + P P GGP P FP P PP G
Sbjct: 682 PPLPGSAGIPPPP--PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG 734
>AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.
Length = 1272
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = +3
Query: 717 PXFPPXKXPPXPPLXPXLPLXXILXPXFPLXXGGPFXNPXXXFPXXGXXPXPPXG 881
P P P PP P LP + P P GGP P FP P PP G
Sbjct: 692 PPLPGSAGIPPPP--PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG 744
>AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein.
Length = 179
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = +3
Query: 717 PXFPPXKXPPXPPLXPXLPLXXILXPXFPLXXGGPFXNPXXXFPXXGXXPXPPXG 881
P P P PP P LP + P P GGP P FP P PP G
Sbjct: 76 PPLPGSAGIPPPP--PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG 128
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = +3
Query: 717 PXFPPXKXPPXPPLXPXLPLXXILXPXFPLXXGGPFXNPXXXFPXXGXXPXPPXG 881
P P P PP P LP + P P GGP P FP P PP G
Sbjct: 671 PPLPGSAGIPPPP--PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG 723
>AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant
protein.
Length = 1299
Score = 33.5 bits (73), Expect = 1.0
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = +3
Query: 717 PXFPPXKXPPXPPLXPXLPLXXILXPXFPLXXGGPFXNPXXXFPXXGXXPXPPXG 881
P P P PP P LP + P P GGP P FP P PP G
Sbjct: 719 PPLPGSAGIPPPP--PPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPG 771
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 31.5 bits (68), Expect = 4.2
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +3
Query: 717 PXFPPXKXPPXPPLXPXLPLXXILXPXFPLXXGGPFXNPXXXFPXXGXXPXPP 875
P FP + PP PPL P P P P G P P G P PP
Sbjct: 228 PPFPAGQTPPRPPLGPPGP----PGPPGPPPPGQVLPPPLAGPPNRGDRPPPP 276
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 31.5 bits (68), Expect = 4.2
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +3
Query: 717 PXFPPXKXPPXPPLXPXLPLXXILXPXFPLXXGGPFXNPXXXFPXXGXXPXPP 875
P FP + PP PPL P P P P G P P G P PP
Sbjct: 228 PPFPAGQTPPRPPLGPPGP----PGPPGPPPPGQVLPPPLAGPPNRGDRPPPP 276
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 31.5 bits (68), Expect = 4.2
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +3
Query: 717 PXFPPXKXPPXPPLXPXLPLXXILXPXFPLXXGGPFXNPXXXFPXXGXXPXPP 875
P FP + PP PPL P P P P G P P G P PP
Sbjct: 228 PPFPAGQTPPRPPLGPPGP----PGPPGPPPPGQVLPPPLAGPPNRGDRPPPP 276
>AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant
protein.
Length = 410
Score = 31.5 bits (68), Expect = 4.2
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +3
Query: 717 PXFPPXKXPPXPPLXPXLPLXXILXPXFPLXXG-GPFXNPXXXFPXXGXXPXPP 875
P PP P PP P LP + P P G P P P G P PP
Sbjct: 337 PPPPPTYNPNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPP 390
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,085,319
Number of Sequences: 237096
Number of extensions: 819697
Number of successful extensions: 4140
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3541
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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