Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_H14
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0550 - 30151494-30151526,30151620-30151706,30152458-301526...    81   1e-15
02_02_0153 - 7258002-7258034,7258137-7258223,7258991-7259161,725...    77   3e-14
06_03_0440 + 20815528-20815653,20815742-20815912,20816501-208165...    45   1e-09

>01_06_0550 -
           30151494-30151526,30151620-30151706,30152458-30152628,
           30152716-30152757,30152856-30152939
          Length = 138

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
 Frame = +2

Query: 206 PGXPTVSKXELRXQLAKMYKVTP-DXXXXXXXXXXXXXXXXXXXALIYDTLDLXKKFEPK 382
           PG P VSK EL+ +LAK+Y+V   +                    LIYD LD  KK+EPK
Sbjct: 35  PGRPNVSKAELKEKLAKLYEVKDANCIFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPK 94

Query: 383 HRLARHGLYEKKRPTRKQXKERKNRMKKVRG 475
           +RL R+GL  K   +RKQ KERKNR KK+RG
Sbjct: 95  YRLIRNGLATKVEKSRKQMKERKNRAKKIRG 125


>02_02_0153 -
           7258002-7258034,7258137-7258223,7258991-7259161,
           7259261-7259386
          Length = 138

 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
 Frame = +2

Query: 206 PGXPTVSKXELRXQLAKMYKVTP-DXXXXXXXXXXXXXXXXXXXALIYDTLDLXKKFEPK 382
           PG   VSK +L+ +LAK+Y+V   +                    LIYD LD  KK+EPK
Sbjct: 35  PGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPK 94

Query: 383 HRLARHGLYEKKRPTRKQXKERKNRMKKVRG 475
           +RL R+GL  K   +RKQ KERKNR KK+RG
Sbjct: 95  YRLIRNGLATKVEKSRKQMKERKNRAKKIRG 125


>06_03_0440 +
           20815528-20815653,20815742-20815912,20816501-20816584,
           20818831-20818917,20819044-20819076
          Length = 166

 Score = 44.8 bits (101), Expect(2) = 1e-09
 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +2

Query: 206 PGXPTVSKXELRXQLAKMYKVTP-DXXXXXXXXXXXXXXXXXXXALIYDTLDLXKKFEPK 382
           PG   VSK +L+ +LAK+Y+V   +                    LIYD LD  KK+EPK
Sbjct: 35  PGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPK 94

Query: 383 HRLAR 397
           +RL R
Sbjct: 95  YRLIR 99



 Score = 35.9 bits (79), Expect(2) = 1e-09
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +2

Query: 398 HGLYEKKRPTRKQXKERKNRMKKVRG 475
           +GL  K   +RKQ KERKNR KK+RG
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRG 153


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,866,834
Number of Sequences: 37544
Number of extensions: 188235
Number of successful extensions: 592
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)