Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_H10
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0152 - 1168928-1169377                                          171   5e-43
11_01_0155 - 1287003-1287452                                          171   5e-43

>12_01_0152 - 1168928-1169377
          Length = 149

 Score =  171 bits (417), Expect = 5e-43
 Identities = 79/133 (59%), Positives = 98/133 (73%)
 Frame = +3

Query: 84  RXPIQAVQVFGRKXTATAVAYCKRGXGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKXXF 263
           R P   VQ FGRK TA AV+YCK G G+++VNG P++L+ P +L+ K  EPILL G+  F
Sbjct: 7   RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66

Query: 264 SMVDXRXXXXXXXXXAQVYAIRQAISKALIAFYQKYVDXASKKEIKDXLVQYDRSLLVAD 443
             +D R         +Q+YAIRQAI+KAL+A+YQKYVD ASKKE+KD   +YDR+LLVAD
Sbjct: 67  KDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVAD 126

Query: 444 PRRCEPKKFGGPG 482
           PRRCEPKKFGG G
Sbjct: 127 PRRCEPKKFGGRG 139


>11_01_0155 - 1287003-1287452
          Length = 149

 Score =  171 bits (417), Expect = 5e-43
 Identities = 79/133 (59%), Positives = 98/133 (73%)
 Frame = +3

Query: 84  RXPIQAVQVFGRKXTATAVAYCKRGXGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKXXF 263
           R P   VQ FGRK TA AV+YCK G G+++VNG P++L+ P +L+ K  EPILL G+  F
Sbjct: 7   RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRF 66

Query: 264 SMVDXRXXXXXXXXXAQVYAIRQAISKALIAFYQKYVDXASKKEIKDXLVQYDRSLLVAD 443
             +D R         +Q+YAIRQAI+KAL+A+YQKYVD ASKKE+KD   +YDR+LLVAD
Sbjct: 67  KDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVAD 126

Query: 444 PRRCEPKKFGGPG 482
           PRRCEPKKFGG G
Sbjct: 127 PRRCEPKKFGGRG 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,803,434
Number of Sequences: 37544
Number of extensions: 305253
Number of successful extensions: 594
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)