Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_H09
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0264 + 2030080-2031270                                          139   3e-33
01_02_0051 - 10655867-10657057                                        136   3e-32
01_03_0090 - 12347165-12348349                                        135   4e-32

>05_01_0264 + 2030080-2031270
          Length = 396

 Score =  139 bits (336), Expect = 3e-33
 Identities = 70/128 (54%), Positives = 87/128 (67%), Gaps = 2/128 (1%)
 Frame = +3

Query: 324 FLFXSESVGEGXPDXMCDXXSDAILDAXLNQDPDAKVACETIXKTGMVLLCGXITSKANV 503
           FLF SESV EG PD +CD  SDA+LDA L +DPD+KVACET  KT MV++ G IT+KANV
Sbjct: 7   FLFTSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANV 66

Query: 504 DYXKVVRETVXHIGYDDSSTGFDWRTLXLLVAIXDPSPNIAEGV--YLDRXXIDIGAGDQ 677
           DY K+VRET  +IG+  +  G D     +LV I   SP+IA+GV  +  +   +IGAGDQ
Sbjct: 67  DYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQ 126

Query: 678 GLXFXYXT 701
           G  F Y T
Sbjct: 127 GHMFGYAT 134


>01_02_0051 - 10655867-10657057
          Length = 396

 Score =  136 bits (328), Expect = 3e-32
 Identities = 68/128 (53%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
 Frame = +3

Query: 324 FLFXSESVGEGXPDXMCDXXSDAILDAXLNQDPDAKVACETIXKTGMVLLCGXITSKANV 503
           FLF SESV EG PD +CD  SDA+LDA L +DP++KVACET  KT MV++ G IT+KANV
Sbjct: 7   FLFTSESVNEGHPDKLCDQISDAVLDACLAEDPESKVACETCTKTNMVMVFGEITTKANV 66

Query: 504 DYXKVVRETVXHIGYDDSSTGFDWRTLXLLVAIXDPSPNIAEGV--YLDRXXIDIGAGDQ 677
           DY K+VR+T   IG+  +  G D     +LV I   SP+IA+GV  +  +   +IGAGDQ
Sbjct: 67  DYEKIVRDTCRGIGFVSNDVGLDAEHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQ 126

Query: 678 GLXFXYXT 701
           G  F Y T
Sbjct: 127 GHMFGYAT 134


>01_03_0090 - 12347165-12348349
          Length = 394

 Score =  135 bits (327), Expect = 4e-32
 Identities = 69/128 (53%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
 Frame = +3

Query: 324 FLFXSESVGEGXPDXMCDXXSDAILDAXLNQDPDAKVACETIXKTGMVLLCGXITSKANV 503
           FLF SESV EG PD +CD  SDA+LDA L QDPD+KVACET  KT MV++ G IT+KA V
Sbjct: 6   FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATV 65

Query: 504 DYXKVVRETVXHIGYDDSSTGFDWRTLXLLVAIXDPSPNIAEGV--YLDRXXIDIGAGDQ 677
           DY K+VR+T   IG+     G D     +LV I   SP+IA+GV  +  +   +IGAGDQ
Sbjct: 66  DYEKIVRDTCRGIGFVSDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQ 125

Query: 678 GLXFXYXT 701
           G  F Y T
Sbjct: 126 GHMFGYAT 133


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,553,887
Number of Sequences: 37544
Number of extensions: 272895
Number of successful extensions: 337
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)