Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_H09
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 171 6e-43
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 170 1e-42
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 170 1e-42
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 165 4e-41
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 120 1e-27
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 101 9e-22
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 100 2e-21
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 66 4e-11
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 62 5e-10
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 30 2.6
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 171 bits (416), Expect = 6e-43
Identities = 79/126 (62%), Positives = 94/126 (74%)
Frame = +3
Query: 324 FLFXSESVGEGXPDXMCDXXSDAILDAXLNQDPDAKVACETIXKTGMVLLCGXITSKANV 503
FLF SESV EG PD MCD SDA+LDA L QDP AKVACET+ KTGM++LCG ITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 504 DYXKVVRETVXHIGYDDSSTGFDWRTLXLLVAIXDPSPNIAEGVYLDRXXIDIGAGDQGL 683
DY +VR + IGYDDSS GFD++T +LVA+ SP IA GV++D+ D+GAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125
Query: 684 XFXYXT 701
F Y T
Sbjct: 126 MFGYAT 131
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 170 bits (414), Expect = 1e-42
Identities = 79/126 (62%), Positives = 94/126 (74%)
Frame = +3
Query: 324 FLFXSESVGEGXPDXMCDXXSDAILDAXLNQDPDAKVACETIXKTGMVLLCGXITSKANV 503
FLF SESV EG PD MCD SDA+LDA L QDP AKVACET+ KTGM++LCG ITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 504 DYXKVVRETVXHIGYDDSSTGFDWRTLXLLVAIXDPSPNIAEGVYLDRXXIDIGAGDQGL 683
DY +VR + IGYDDSS GFD++T +LVA+ SP IA GV++D+ D+GAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 684 XFXYXT 701
F Y T
Sbjct: 126 MFGYAT 131
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 170 bits (414), Expect = 1e-42
Identities = 79/126 (62%), Positives = 94/126 (74%)
Frame = +3
Query: 324 FLFXSESVGEGXPDXMCDXXSDAILDAXLNQDPDAKVACETIXKTGMVLLCGXITSKANV 503
FLF SESV EG PD MCD SDA+LDA L QDP AKVACET+ KTGM++LCG ITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 504 DYXKVVRETVXHIGYDDSSTGFDWRTLXLLVAIXDPSPNIAEGVYLDRXXIDIGAGDQGL 683
DY +VR + IGYDDSS GFD++T +LVA+ SP IA GV++D+ D+GAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 684 XFXYXT 701
F Y T
Sbjct: 126 MFGYAT 131
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 165 bits (401), Expect = 4e-41
Identities = 78/128 (60%), Positives = 94/128 (73%)
Frame = +3
Query: 318 SVFLFXSESVGEGXPDXMCDXXSDAILDAXLNQDPDAKVACETIXKTGMVLLCGXITSKA 497
S FLF SESV EG PD MCD SDA+LDA L QDP+AKVACET+ KTGMV+LCG ITSKA
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62
Query: 498 NVDYXKVVRETVXHIGYDDSSTGFDWRTLXLLVAIXDPSPNIAEGVYLDRXXIDIGAGDQ 677
VDY +VR + IG+ DSS GFD +T +LVA+ SP IA GV++++ D+GAGDQ
Sbjct: 63 VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQ 122
Query: 678 GLXFXYXT 701
G+ F Y T
Sbjct: 123 GIMFGYAT 130
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 120 bits (289), Expect = 1e-27
Identities = 56/81 (69%), Positives = 62/81 (76%)
Frame = +3
Query: 324 FLFXSESVGEGXPDXMCDXXSDAILDAXLNQDPDAKVACETIXKTGMVLLCGXITSKANV 503
FLF SESV EG PD MCD SDA+LDA L QDP AKVACET+ KTGM++LCG ITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 504 DYXKVVRETVXHIGYDDSSTG 566
DY +VR + IGYDDSS G
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKG 86
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 101 bits (241), Expect = 9e-22
Identities = 45/80 (56%), Positives = 58/80 (72%)
Frame = +3
Query: 462 MVLLCGXITSKANVDYXKVVRETVXHIGYDDSSTGFDWRTLXLLVAIXDPSPNIAEGVYL 641
M++LCG ITSKA VDY +VR + IGYDDSS GFD++T +LVA+ SP IA GV++
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 642 DRXXIDIGAGDQGLXFXYXT 701
D+ D+GAGDQG+ F Y T
Sbjct: 61 DKDIADVGAGDQGIMFGYAT 80
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 100 bits (239), Expect = 2e-21
Identities = 45/80 (56%), Positives = 58/80 (72%)
Frame = +3
Query: 462 MVLLCGXITSKANVDYXKVVRETVXHIGYDDSSTGFDWRTLXLLVAIXDPSPNIAEGVYL 641
M++LCG ITSKA VDY +VR + IGYDDSS GFD++T +LVA+ SP IA GV++
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 642 DRXXIDIGAGDQGLXFXYXT 701
D+ D+GAGDQG+ F Y T
Sbjct: 61 DKDSDDVGAGDQGIMFGYAT 80
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 65.7 bits (153), Expect = 4e-11
Identities = 33/50 (66%), Positives = 35/50 (70%)
Frame = +3
Query: 324 FLFXSESVGEGXPDXMCDXXSDAILDAXLNQDPDAKVACETIXKTGMVLL 473
FLF SESV EG PD MCD SDA+LDA L QDP AKVAC KT VL+
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLV 55
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +3
Query: 564 GFDWRTLXLLVAIXDPSPNIAEGVYLDRXXIDIGAGDQGLXFXYXT 701
GFD++T +LVA+ SP IA GV++D+ D+GAGDQG+ F Y T
Sbjct: 45 GFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYAT 90
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/39 (74%), Positives = 30/39 (76%)
Frame = +3
Query: 324 FLFXSESVGEGXPDXMCDXXSDAILDAXLNQDPDAKVAC 440
FLF SESV EG PD MCD SDA+LDA L QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 62.1 bits (144), Expect = 5e-10
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +3
Query: 543 GYDDSSTGFDWRTLXLLVAIXDPSPNIAEGVYLDRXXIDIGAGDQGLXFXYXT 701
GY D GFD++T +LVA+ SP IA GV++D+ D+GAGDQG+ F Y T
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYAT 72
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 324 FLFXSESVGEGXPDXMCD 377
FLF SESV EG PD MCD
Sbjct: 6 FLFTSESVSEGHPDKMCD 23
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 390 AILDAXLNQDPDAKVACETIXKTGM-VLLCGXITSKANVDYXKVVRET 530
A +D + Q P+ +C + G VL+ +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 390 AILDAXLNQDPDAKVACETIXKTGM-VLLCGXITSKANVDYXKVVRET 530
A +D + Q P+ +C + G VL+ +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 390 AILDAXLNQDPDAKVACETIXKTGM-VLLCGXITSKANVDYXKVVRET 530
A +D + Q P+ +C + G VL+ +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,853,044
Number of Sequences: 27780
Number of extensions: 238606
Number of successful extensions: 330
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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