Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_H06
(911 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.002
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.006
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.018
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.056
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.098
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.40
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.69
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 29 0.92
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 0.92
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.92
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 4.9
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -1
Query: 908 GGVGXGPPXXXGGXXXXXRXXGXVXGGXGXGGXXXGG-GGGGGXXGGXG 765
GG G GP GG G GG G G GG GGG G GG G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -3
Query: 699 GGGXXRXGXGXXGGGX--FGGXXPGGGGG 619
G G G G GGG FGG G GGG
Sbjct: 229 GPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.3 bits (80), Expect = 0.006
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 599 PXTGXKXPPPPPGXXPPNXPPPXXP 673
P PPPPPG PP+ PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 35.9 bits (79), Expect = 0.008
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 772 PPXXPPPPPPPXXXPPXPXPPXTXP 846
PP PPPPPPP P PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 35.5 bits (78), Expect = 0.011
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 772 PPXXPPPPPPPXXXPPXPXPPXTXP 846
P PPPPPPP PP PP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 33.1 bits (72), Expect = 0.056
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 629 PPGXXPPNXPPPXXPXPXRXXPPP 700
PPG PP PPP P + PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +1
Query: 766 PXPPXXPPPPP--PPXXXPPXPXPP 834
P P PPPPP P PP P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 623 PPPPGXXPPNXPPPXXPXPXRXXPPPXG 706
PPPP PP PP P P PPP G
Sbjct: 9 PPPPPP-PPGFEPPSQPPP----PPPPG 31
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +1
Query: 799 PPXXXPPXPXPPXTXPXXRXXXXXPP 876
PP PP P PP P + PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPPXXXGGPQPTP 906
P P PP PPP PP P P P PP P PTP
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVP------PVPPPSTAPPVPTP 1222
Score = 33.9 bits (74), Expect = 0.032
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPP-XXXGGPQPTP 906
P P PP P P PP P P P + PP G P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 32.7 bits (71), Expect = 0.074
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPPXXXGGPQPT 903
P P PP P P PP P P T P + P P P+
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Score = 32.3 bits (70), Expect = 0.098
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPP 876
P P PP P P PP P P P + PP
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPP 876
P P PP P P PP P P P PP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPP 876
P P PP P P PP P P P PP
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPP 876
P P PP P P PP P P P PP
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +1
Query: 784 PPPPPPPXXXPPXPXPPXTXPXXRXXXXXPP-XXXGGPQPTP 906
PP P P PP P P P + PP G P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 29.5 bits (63), Expect = 0.69
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 4/51 (7%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXP----PXTXPXXRXXXXXPPXXXGGPQPTP 906
P P PP P P PP P P P PP P P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXP 846
P P PP P P PP P P P
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPP 876
P P P P P PP P P P + PP
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +1
Query: 772 PPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPPXXXGGPQPTP 906
PP PP PP P PP P + P TP
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/41 (29%), Positives = 13/41 (31%)
Frame = +1
Query: 784 PPPPPPPXXXPPXPXPPXTXPXXRXXXXXPPXXXGGPQPTP 906
PP P P PP P P P P P+P
Sbjct: 1227 PPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/43 (32%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Frame = +1
Query: 784 PPPPPPPXXXPPXPXPPXTXPXXRXXXXXP-PXXXGGPQPTPP 909
PP P P PP P P P P P G PP
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.056
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 5/47 (10%)
Frame = +1
Query: 784 PPPPPPPXXXP-----PXPXPPXTXPXXRXXXXXPPXXXGGPQPTPP 909
PPPPPP P P P PP PP G P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 32.3 bits (70), Expect = 0.098
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 608 GXKXPPPPPGXXPPNXPPPXXPXP 679
G PPPPPG PPP P P
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPPXXXG-GPQPTPP 909
P P P PPP P P P PP PP G GP P PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPP------------PPGVAGAGPPPPPP 780
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +1
Query: 772 PPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPPXXXGGPQP 900
PP PPPP PP P PP P P+P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 30.3 bits (65), Expect = 0.40
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 599 PXTGXKXPPPPPGXXPPNXPPPXXPXP 679
P G PPPPP PPP P P
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 757 TXXPXPPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPP 876
T P P PPP P PP P PP PP
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 0.92
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPP 876
P P P P PPP P PP P PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +2
Query: 620 PPPPP--GXXPPNXPPPXXPXPXRXXPPP 700
PPP P G PP PPP PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 590 TTTPXTGXKXPPPPPGXXPPNXPPPXXPXPXRXXPPP 700
T P PP P PP PPP PPP
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 433 PPXXXPXPPPPPXG 392
P P PPPPP G
Sbjct: 756 PIMGGPPPPPPPPG 769
Score = 22.2 bits (45), Expect(2) = 3.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -2
Query: 418 PXPPPPPXGAXXXXGA 371
P PPPPP A G+
Sbjct: 775 PPPPPPPPPAVSAGGS 790
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.098
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 754 QTXXPXPPXXPPPPPPPXXXPPXPXPPXTXP 846
Q P PP P PPP PP P P + P
Sbjct: 1701 QMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXP 846
P PP PP P P PP P P + P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 754 QTXXPXPPXXPPPPPPPXXXPPXPXPP 834
Q+ P P PPPPP PP P P
Sbjct: 1695 QSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 620 PPPPPGXXPPNXPPPXXPXPXRXXPPP 700
PPPP PP PP P PPP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.1 bits (62), Expect = 0.92
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 766 PXPPXXPPPPP--PPXXXPPXPXPPXTXP 846
P PP PPPP PP P PP P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 772 PPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPPXXXGGPQPTPP 909
PP P PP P P PP P P GP PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPP---PMSVPPPPSAPPMPAGPPSAPP 1732
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 772 PPXXPPPPPPPXXXPPXPXP 831
PP PPPP P P P P
Sbjct: 1727 PPSAPPPPLPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 593 TTPXTGXKXPPPPPGXXPPNXPPPXXPXP 679
T P PPPP P PP P P
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.3 bits (65), Expect = 0.40
Identities = 15/56 (26%), Positives = 16/56 (28%)
Frame = +1
Query: 658 PPXXPPPXXXXPPPXGXXHNTXXXXXXXXTXXQTXXPXPPXXPPPPPPPXXXPPXP 825
PP PP P + P PP P PPP P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 29.1 bits (62), Expect = 0.92
Identities = 28/91 (30%), Positives = 28/91 (30%), Gaps = 7/91 (7%)
Frame = +1
Query: 658 PPXXPP--PXXXXP--PPXGXXHNTXXXXXXXXTXXQTXXPXPPXXPPPPPPPXXXPPXP 825
PP PP P P PP G T T P P PP PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTS-------TPPVPTPPSLPPSAPPSLPPSAPPSLP 440
Query: 826 -XPPXTXPXXRXXXXXPPXXXGGP--QPTPP 909
P P PP G P P PP
Sbjct: 441 MGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 28.3 bits (60), Expect = 1.6
Identities = 25/94 (26%), Positives = 27/94 (28%), Gaps = 10/94 (10%)
Frame = +1
Query: 658 PPXXPPPXXXX--PPPXGXXHNTXXXXXXXXTXXQTXX---PXPPXX--PPPPPPPXXXP 816
PP PPP PP G + P PP PPPPPP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 817 P---XPXPPXTXPXXRXXXXXPPXXXGGPQPTPP 909
P P + PP G P P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP 404
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +2
Query: 593 TTPXTGXKXPPPPPGXXPPNXPPPXXPXPXRXXP--PPXG 706
+ P TG + PP N P P P R P PP G
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLG 407
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 620 PPPPPGXXPPNXPPPXXPXPXRXXPPP 700
P PP G P PPP PPP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/64 (26%), Positives = 17/64 (26%), Gaps = 1/64 (1%)
Frame = +1
Query: 658 PPXXPPPXXXXPPPXGXXHNTXXXXXXXXTXXQTXXPXP-PXXPPPPPPPXXXPPXPXPP 834
PP PP PP P P PP PP PP P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Query: 835 XTXP 846
P
Sbjct: 484 PAAP 487
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 596 TPXTGXKXPPPPPGXXPPNXPPPXXPXPXRXXPPP 700
TP T PP PP P + PP P PPP
Sbjct: 223 TP-TSTSAPPIPPSI-PSSRPPERVPSLSAPAPPP 255
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/36 (36%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Frame = +2
Query: 599 PXTGXKXPPPPPGXXPPN---XPPPXXPXPXRXXPP 697
P G PPPPP P+ PPP PP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP 389
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 887 PXXXGGXXXXXRXXGXVXGGXGXGGXXXGGGGGGGXXGGXG 765
P GG G GG G G GG GGG G G
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG 45
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -1
Query: 911 GGGVGXGPPXXXGGXXXXXRXXGXVXGGXGXGGXXXGGGGGG 786
GGG G GG G GG G GG GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 29.1 bits (62), Expect = 0.92
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 590 TTTPXTGXKXPPPPP--GXXPPNXPPPXXPXPXRXXP 694
TTTP G + P P G PP PPP P P P
Sbjct: 336 TTTPFAGNQVMPTPQVQGSRPP--PPPPMPAPIYNVP 370
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.1 bits (62), Expect = 0.92
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -3
Query: 705 PXGGGXXRXGXGXXGG-GXFGGXXPGGGG 622
P GG R G G GG G FGG GGG
Sbjct: 443 PRTGGGSRGGRGGFGGRGGFGGRGGFGGG 471
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.92
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 772 PPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPPXXXGGPQPTPP 909
PP PPP P PP P P PP P +PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIP----SSLPPPAQPAAPVKSPP 185
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 775 PXXPPPPPPPXXXPPXPXPP 834
P PPPPP P P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/78 (24%), Positives = 19/78 (24%), Gaps = 6/78 (7%)
Frame = +1
Query: 661 PXXPPPXXXXPPPXGXXHNTXXXXXXXXTXXQTXXPXPPXXP------PPPPPPXXXPPX 822
P PPP PP PP P PP PP PP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPL 206
Query: 823 PXPPXTXPXXRXXXXXPP 876
P R PP
Sbjct: 207 SQAPVANTSSRPSSFAPP 224
Score = 25.8 bits (54), Expect = 8.5
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 8/54 (14%)
Frame = +1
Query: 772 PPXXPPPPPP------PXXXPPXP--XPPXTXPXXRXXXXXPPXXXGGPQPTPP 909
PP P PP P P PP P PP PP P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 696 GGXXRXGXGXXGGGXFGGXXPGGGGGXF 613
GG R G G G FGG GG G F
Sbjct: 155 GGNSRGGFGGGSRGGFGGGSRGGSRGGF 182
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/60 (26%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = +1
Query: 670 PPPXXXXPPPXGXXHNTXXXXXXXXTXXQTXXPX-PPXXPPPPPPPXXXPPXPXPPXTXP 846
PPP PP + + P PP P P PP P PP P
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 626 PPPGXXPPNXPPPXXPXPXRXXPPP 700
PPP PP+ P P PPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPP 191
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/48 (27%), Positives = 13/48 (27%)
Frame = +1
Query: 661 PXXPPPXXXXPPPXGXXHNTXXXXXXXXTXXQTXXPXPPXXPPPPPPP 804
P PPP P Q P PP P PP P
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRP 285
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 790 PPPPPXXXPPXPXPPXTXPXXRXXXXXPP 876
PPPPP P PP P PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 766 PXPPXXPPPPPPPXXXPPXPXPPXTXPXXRXXXXXPPXXXGGPQPTP 906
P PP P PP P PP P P G P P P
Sbjct: 1884 PPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNP---GMPAPVP 1927
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +1
Query: 661 PXXPPPXXXXPPPXGXXHNTXXXXXXXXTXXQTXXPXPPXXPPPPPP 801
P PPP H T P P PPPPPP
Sbjct: 907 PPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPP 953
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 775 PXXPPPPPPP 804
P PPPPPPP
Sbjct: 942 PAFPPPPPPP 951
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.150 0.529
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,598,078
Number of Sequences: 5004
Number of extensions: 27614
Number of successful extensions: 362
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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