Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_H01
         (847 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16665-1|CAA34655.1|  356|Homo sapiens protein ( Human HOX2H mRN...    32   3.0  
BC074806-1|AAH74806.1|  356|Homo sapiens homeobox B2 protein.          32   3.0  
BC074805-1|AAH74805.1|  356|Homo sapiens homeobox B2 protein.          32   3.0  

>X16665-1|CAA34655.1|  356|Homo sapiens protein ( Human HOX2H mRNA
           from the Hox2 locus. ).
          Length = 356

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = +2

Query: 143 LPPMNPLDKXLAXLRIYANALX---AKLQAXINPAKXXPSLPPKXNKAPLPQIPQSYTVK 313
           +PP  P ++    L+  A+ L    ++ +A   PA   P  PP     P P+ P     K
Sbjct: 43  IPPPPPFEQTFPSLQPGASTLQRPRSQKRAEDGPALPPPPPPPLPAAPPAPEFPWMKEKK 102

Query: 314 SACEPSYSS 340
           SA +PS S+
Sbjct: 103 SAKKPSQSA 111


>BC074806-1|AAH74806.1|  356|Homo sapiens homeobox B2 protein.
          Length = 356

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = +2

Query: 143 LPPMNPLDKXLAXLRIYANALX---AKLQAXINPAKXXPSLPPKXNKAPLPQIPQSYTVK 313
           +PP  P ++    L+  A+ L    ++ +A   PA   P  PP     P P+ P     K
Sbjct: 43  IPPPPPFEQTFPSLQPGASTLQRPRSQKRAEDGPALPPPPPPPLPAAPPAPEFPWMKEKK 102

Query: 314 SACEPSYSS 340
           SA +PS S+
Sbjct: 103 SAKKPSQSA 111


>BC074805-1|AAH74805.1|  356|Homo sapiens homeobox B2 protein.
          Length = 356

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = +2

Query: 143 LPPMNPLDKXLAXLRIYANALX---AKLQAXINPAKXXPSLPPKXNKAPLPQIPQSYTVK 313
           +PP  P ++    L+  A+ L    ++ +A   PA   P  PP     P P+ P     K
Sbjct: 43  IPPPPPFEQTFPSLQPGASTLQRPRSQKRAEDGPALPPPPPPPLPAAPPAPEFPWMKEKK 102

Query: 314 SACEPSYSS 340
           SA +PS S+
Sbjct: 103 SAKKPSQSA 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,648,096
Number of Sequences: 237096
Number of extensions: 1533989
Number of successful extensions: 2658
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2658
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)