Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_G21
(962 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 42 1e-04
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 41 3e-04
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 37 0.004
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.034
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.14
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.18
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.32
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 30 0.56
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.56
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.3
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 5.2
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 5.2
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 5.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 6.1
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 42.3 bits (95), Expect = 1e-04
Identities = 31/81 (38%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Frame = -1
Query: 935 GXGXXGGGCAPIXXEXAXGXXGGXGXXXGGGXRXWGXGG--GGRGXXEGX-GGXRGGAXC 765
G G GGG G GG G G G G GG GG G EG GG GG
Sbjct: 189 GFGGFGGGSG--GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 764 EWXXXGXXGGXXGGTXGGGXG 702
G GG GG GG G
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGG 267
Score = 34.7 bits (76), Expect = 0.020
Identities = 27/89 (30%), Positives = 28/89 (31%), Gaps = 1/89 (1%)
Frame = -2
Query: 883 GGXXGGXGXXXGXXXXXXXXXXXXXXXXXXXXGXXGGRXASGXXAGXXGGXXGXQXG-GG 707
GG GG G G G G G GG G G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 706 XGWXVSTXGGXPXV*GGGGGXXGXGGXPG 620
G + GG P GG GG G G PG
Sbjct: 247 FGGGLGGFGGGP---GGFGGGPGGHGGPG 272
Score = 34.7 bits (76), Expect = 0.020
Identities = 23/60 (38%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = -1
Query: 851 GGGXRXWGXGGGGRGXXEGXGGXRGGAXCEWXXXGXXGGXXGGTXG--GGXGVEXXHAGG 678
GGG +G G GG G G GG E G GG GG G GG G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Score = 34.3 bits (75), Expect = 0.026
Identities = 26/79 (32%), Positives = 26/79 (32%), Gaps = 2/79 (2%)
Frame = -1
Query: 881 GXXGGXGXXXGGGXRXWGXGGGGR--GXXEGXGGXRGGAXCEWXXXGXXGGXXGGTXGGG 708
G GG GG G GG G G G GG GG G G GG GG
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
Query: 707 XGVEXXHAGGXXXRVRGGW 651
G GG GW
Sbjct: 255 GGGPGGFGGGPGGHGGPGW 273
Score = 25.8 bits (54), Expect = 9.1
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -1
Query: 935 GXGXXGGGCAPIXXEXAXGXXGGXGXXXGGGXRXWGXGGGGRG 807
G G G P G GG GGG +G G GG G
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 40.7 bits (91), Expect = 3e-04
Identities = 25/63 (39%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 881 GXXGGXGXXXGG-GXRXWGXGGGGRGXXEGXGGXRGGAXCEWXXXGXXGGXXGGTXGGGX 705
G GG G GG G G GG G G GG RGGA G G GG+ GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Query: 704 GVE 696
G +
Sbjct: 66 GAK 68
Score = 39.5 bits (88), Expect = 7e-04
Identities = 27/76 (35%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Frame = -1
Query: 881 GXXGGXGXXXGG-GXRXWGXGGGGRGXXEGXGGXRGGAXCEWXXXGXXGGXXGGTXGGGX 705
G GG GG G G GGGRG G G RGGA G G GG GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGAR---GGRGGSSGGRGGAKGGAK 72
Query: 704 GVEXXHAGGXXXRVRG 657
+ H RG
Sbjct: 73 VIIEPHRHAGVFIARG 88
Score = 35.5 bits (78), Expect = 0.011
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = -2
Query: 778 GGRXASGXXAGXXGGXXGXQXGGGXGWXVSTXGGXPXV*GG-GGGXXGXGGXPG 620
GGR G GG G GGG G GG GG GG G GG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 34.7 bits (76), Expect = 0.020
Identities = 24/63 (38%), Positives = 24/63 (38%)
Frame = -1
Query: 809 GXXEGXGGXRGGAXCEWXXXGXXGGXXGGTXGGGXGVEXXHAGGXXXRVRGGWRXXRRXG 630
G G GG RGG G GG GG GGG G GG RGG R R
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG-----RGGARGGRGGS 60
Query: 629 XAG 621
G
Sbjct: 61 SGG 63
Score = 29.9 bits (64), Expect = 0.56
Identities = 24/62 (38%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = -1
Query: 830 GXGG--GGRGXXEGXGGXRGGAXCEWXXXGXXGGXXGGTXGGGXGVEXXHAG-GXXXRVR 660
G GG GGRG G G GG G GG GG GG G G G R
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGG-----RGGARGGGRGGARGGRGGRGGARGGRGGSSGGR 64
Query: 659 GG 654
GG
Sbjct: 65 GG 66
Score = 29.1 bits (62), Expect = 0.98
Identities = 22/55 (40%), Positives = 23/55 (41%)
Frame = -1
Query: 935 GXGXXGGGCAPIXXEXAXGXXGGXGXXXGGGXRXWGXGGGGRGXXEGXGGXRGGA 771
G G GGG G GG G GG R G GG G G GG +GGA
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGR--GGAR--GGRGGSSG---GRGGAKGGA 71
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 961 GRGAX-GXXXGXGXGGGGARQ*XXRXRGGXXGGXGXXXG 848
GRG G G G G GGAR RGG GG G G
Sbjct: 17 GRGGFNGGRGGFGGGRGGAR---GGGRGGARGGRGGRGG 52
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 909 RANXXXGGXGGGXGGXGXXXGXXKXLGXXWGGEGXXXG 796
R GG GG GG G G G GG G G
Sbjct: 32 RGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 25.8 bits (54), Expect = 9.1
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = -3
Query: 750 RXXXGAGRGXKXGGEXGGXXARXGGXPACEGGVAXXXAXGGXRGXGXLGXPPXRG 586
R GRG GG G AR GG GG G RG G +G
Sbjct: 18 RGGFNGGRGGFGGGRGG---ARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 37.1 bits (82), Expect = 0.004
Identities = 27/69 (39%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -1
Query: 824 GGGGRGXXEGXGGXRGGAXCEWXXXGXXGGXXGGTXGG-GXGVEXXHAGGXXXRVRGGWR 648
G GRG G GG RGG G GG G + GG G G GG RGG+R
Sbjct: 133 GPAGRG---GRGGFRGGRG------GSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFR 183
Query: 647 XXRRXGXAG 621
R G G
Sbjct: 184 GGSRGGFRG 192
Score = 36.7 bits (81), Expect = 0.005
Identities = 27/67 (40%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -1
Query: 845 GXRXWGXGGGGRGXXEGX-GGXRGGAXCEWXXXGXXGGXXGGTXGGGXGVEXXHAGGXXX 669
G R G GGRG G GG RGG G GG GG GG G GG
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGN-SRGGFGGGSRGGFGGGSRG---GSRGGFRG 184
Query: 668 RVRGGWR 648
RGG+R
Sbjct: 185 GSRGGFR 191
Score = 33.9 bits (74), Expect = 0.034
Identities = 24/58 (41%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -1
Query: 872 GGXGXXXGG-GXRXWGXGGGGRGXXEGXGGXRGGAXCEWXXXGXXGGXXGGTXGGGXG 702
GG G GG G G GG RG GG RGG G GG GG GG G
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGF--GGGSRGG-----FGGGSRGGSRGGFRGGSRG 188
Score = 26.6 bits (56), Expect = 5.2
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -1
Query: 929 GXXGGGCAPIXXEXAXGXXGGXGXXXGGGXRXWGXGGGGRGXXEGXGGXRG 777
G GG G GG GGG R G GG RG GG RG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRG-GSRGGFRGG--SRGGFRG 192
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.034
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Frame = +1
Query: 760 HSXXAPPRXP----PXPSXXPLPPPPXPQXLXPPPXXXPXPPXXPXA 888
H PP P P P PPPP P + PPP P P P A
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPPP-PMSVPPPPSAPPMPAGPPSA 1730
Score = 30.3 bits (65), Expect = 0.42
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +1
Query: 748 PXXXHSXXAPPRXPPXPSXXP-LPPPPXPQXLXP 846
P S PP PP P+ P PPPP P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 29.9 bits (64), Expect = 0.56
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +2
Query: 605 PSXPXPRXPPXAXXXATPPSHAGXPPXRAXXP-PXSPPXLXPLPAP 739
P P PP PP PP + P P PP P P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 587 PLXGGXPSXPXPRXPPXAXXXATPPSHAGXPPXRAXXPPXSPPXLXPLPAP 739
P P P PP PPS PP A P PP L AP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPS---APPMPAGPPSAPPPPLPASSAP 1741
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 778 PRXPPXPSXXPLPPPPXPQXLXPPPXXXPXPP 873
P PP P P PP P PP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +1
Query: 748 PXXXHSXXAPPRXPPXPSXXPLPPPPXPQXLXPPPXXXPXPPXXPXAXS 894
P S P P P P+ PP P P P P P P S
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPS-APPMPAGPPSAPPPPLPAS 1738
Score = 26.6 bits (56), Expect = 5.2
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +2
Query: 590 LXGGXPSXPXPRXPPXAXXXATPPSHAGX--PPXRAXXPPXSPPXLXPLPA 736
L GG PP A PP + PP PP PP P+PA
Sbjct: 1677 LFGGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP--PPSAPPMPA 1725
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 796 PSXXPLPPPPXPQXLXPPPXXXPXPPXXP 882
P+ PP PQ PP P PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPP 1711
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 790 PXPSXXPLPPPPXPQXLXPPPXXXPXPPXXP 882
P PS P PP P Q L P P P P
Sbjct: 1470 PAPSSAPAPPAPVSQ-LPPAVPNVPVPSMIP 1499
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 778 PRXPPXPSXXPLPPPPXPQXLXPPPXXXPXP 870
P PP P+ P PP P PPP P P
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 30.7 bits (66), Expect = 0.32
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = +1
Query: 778 PRXPPXPSXXPLPPP-PXPQXLXPP-PXXXPXPPXXP 882
P PP P P+ PP P PP P P PP P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 5/58 (8%)
Frame = +1
Query: 748 PXXXHSXXAPPRXPPXPSXXPLPPPPXPQXLXPP-----PXXXPXPPXXPXAXSXXIG 906
P S + P P PS P PP P P P P PP P A G
Sbjct: 405 PLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG 462
Score = 27.1 bits (57), Expect = 3.9
Identities = 25/101 (24%), Positives = 31/101 (30%), Gaps = 5/101 (4%)
Frame = +2
Query: 545 TSAXLIHPGPRXQXPLXGGXPSXPXPRXPPXAXXXATPPSHAGXPP----XRA-XXPPXS 709
+++ L P P + G P P R P + PS PP RA PP
Sbjct: 332 SNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Query: 710 PPXLXPLPAPXXXRXXXXXXXXXXXXXXXPXXXPSPPHXXP 832
PP + AP P PS P P
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP 432
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +1
Query: 775 PPRXPPX-PSXXPLPPP-PXPQXLXPP-PXXXPXPPXXPXA 888
PP PP P P PP P + PP P P P P A
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPA 472
Score = 26.6 bits (56), Expect = 5.2
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +2
Query: 572 PRXQXPLXGGXPSXPXPRXPPXAXXXATPPSHAGXPPXRAXXPPXSPPXLXPLPAP 739
P L G P+ P PP A PP AG P P P P PAP
Sbjct: 433 PSAPPSLPMGAPAAPP--LPPSAPI--APPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 26.2 bits (55), Expect = 6.9
Identities = 24/93 (25%), Positives = 27/93 (29%), Gaps = 4/93 (4%)
Frame = +2
Query: 605 PSXPXPRXPP--XAXXXATP--PSHAGXPPXRAXXPPXSPPXLXPLPAPXXXRXXXXXXX 772
P P PP A +TP P+ PP P S P P+ AP
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI 455
Query: 773 XXXXXXXXPXXXPSPPHXXPKXFXXPXXXPXPP 871
P P PP P P P P
Sbjct: 456 APPLPAGMPAAPPLPP-AAPAPPPAPAPAPAAP 487
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +1
Query: 772 APPRXPPXPSXXPLPPPPXPQXLXPPPXXXPXPPXXPXA 888
APPR P P P PP P P P P PP P A
Sbjct: 143 APPR-PSIPPPSPASAPPIPSKAPPIPSSLP-PPAQPAA 179
Score = 29.5 bits (63), Expect = 0.74
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 763 SXXAPPRXPPXPSXXPLPPPPXPQXLXPPPXXXPXPP 873
S PP P P P P P + P P P PP
Sbjct: 169 SSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 3.9
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 7/62 (11%)
Frame = +2
Query: 572 PRXQXPLXGGXPSXPXPRXPPXAXXXATP-PSHAGX------PPXRAXXPPXSPPXLXPL 730
P Q L + P P PP + A P PS A PP + P SPP L
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSL 190
Query: 731 PA 736
P+
Sbjct: 191 PS 192
Score = 26.6 bits (56), Expect = 5.2
Identities = 13/54 (24%), Positives = 17/54 (31%)
Frame = +2
Query: 572 PRXQXPLXGGXPSXPXPRXPPXAXXXATPPSHAGXPPXRAXXPPXSPPXLXPLP 733
PR P + P P P PP+ P P P + P+P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Score = 26.6 bits (56), Expect = 5.2
Identities = 16/58 (27%), Positives = 19/58 (32%)
Frame = +2
Query: 566 PGPRXQXPLXGGXPSXPXPRXPPXAXXXATPPSHAGXPPXRAXXPPXSPPXLXPLPAP 739
P P P+ P P PP A P + PP P PP +P P
Sbjct: 152 PSPASAPPIPSKAPPIPSSLPPP-----AQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 748 PXXXHSXXAPPRXPPXPSXXPLPPPPXPQXLXPPPXXXPXPP 873
P + P + PP PS LPPP P P P P
Sbjct: 152 PSPASAPPIPSKAPPIPS--SLPPPAQPAAPVKSPPSAPSLP 191
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.32
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 775 PPRXPPXPSXXPLPPPPXPQXLXPPPXXXPXP 870
PP P P PPPP PPP P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.74
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = +1
Query: 775 PPRXP----PXPSXXPLP-PPPXPQXLXPPPXXXPXPP 873
PP P P P+ P+P PPP P PPP P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP--PPPPP 768
Score = 29.5 bits (63), Expect = 0.74
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +1
Query: 778 PRXPPXP-SXXPLPPPPXPQXLXPPPXXXPXPP 873
P PP P P PPPP P P P PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 814 PPPPXPQXLXPPPXXXPXPPXXP 882
PPPP P + P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP 754
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 808 PLPPPPXPQXLXPPPXXXPXPPXXP 882
P PPPP P P P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.9 bits (64), Expect = 0.56
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -1
Query: 851 GGGXRXWGXGGGGRGXXEGXGGXRGG 774
GGG R G GGRG G GG GG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGG 471
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.56
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 763 SXXAPPRXPPXPSXXPLPPPPXPQXLXPP 849
S AP PP P+ +PP P P PP
Sbjct: 1075 SIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +2
Query: 599 GXPSXPXPRXPPXAXXXATP-PSHAGXPPXRAXXPPXSPPXLXPLPAP 739
G PS P P P + + P PS A P + PP P + P P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 748 PXXXHSXXAPPRXPPXPSXXPLPPPPXPQXLXPPPXXXPXPP 873
P S APP P P+P P PPP P P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = +1
Query: 787 PPXPSXXPLPPPPXPQXLXPP-PXXXPXPP 873
PP P+ PP P P PP P PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 26.6 bits (56), Expect = 5.2
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +2
Query: 566 PGPRXQXPLXGGXPSXPXPRXPPXAXXXATPPSHAGXPPXRAXXPPXSPPXLXPLPAP 739
P P P+ PS P PP + P AG PP P P P+PAP
Sbjct: 1192 PPPSEAPPVP--KPSVGVPPVPPPSTAPPVPTPSAGLPP--VPVPTAKAP---PVPAP 1242
Score = 26.2 bits (55), Expect = 6.9
Identities = 24/99 (24%), Positives = 27/99 (27%), Gaps = 7/99 (7%)
Frame = +2
Query: 587 PLXGGXPSXPXPRX--PPXAXXXATPP----SHAGXP-PXRAXXPPXSPPXLXPLPAPXX 745
P G P P P PP PP S A P P + PP P + P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 746 XRXXXXXXXXXXXXXXXPXXXPSPPHXXPKXFXXPXXXP 862
P +PP P P P
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 814 PPPPXPQXLXPPPXXXPXPP 873
PPPP P PP P PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 5.2
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Frame = +2
Query: 605 PSXPXPRXPPXAXXXATPPSHAGXPPXRAXXPPXSP-PXLXPLP 733
P P PR PP G PP P P P PLP
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 814 PPPPXPQXLXPPPXXXPXPP 873
PPPP PQ PP PP
Sbjct: 206 PPPPPPQQNYPPAASSSAPP 225
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 5.2
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 763 SXXAPPRXPPXPSXXPLPPPPXPQXLXPPPXXXPXPPXXPXA 888
S PP P P +P PP + P P PP P A
Sbjct: 573 SVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSV-PQPPVAPVA 613
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 22.6 bits (46), Expect(2) = 6.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 763 SXXAPPRXPPXPSXXPLPPPPXP 831
S AP P P PPPP P
Sbjct: 175 SAAAPATSLPSDYNPPPPPPPPP 197
Score = 21.8 bits (44), Expect(2) = 6.1
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +1
Query: 811 LPPPPXPQXLXPPPXXXPXPP 873
+PP P+ P P P PP
Sbjct: 223 IPPTYTPKQADPLPAPPPPPP 243
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,879,693
Number of Sequences: 5004
Number of extensions: 23973
Number of successful extensions: 325
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 493304942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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