Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_G19
         (847 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119556-1|AAM50210.1| 1272|Drosophila melanogaster GH28840p pro...    29   6.1  
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P...    29   6.1  

>AY119556-1|AAM50210.1| 1272|Drosophila melanogaster GH28840p
           protein.
          Length = 1272

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = +3

Query: 33  GPSXHTFVFXFGSAPLSAPPXXXRSSXRWXXPPGLSSSPAFPPGXLPRALSCSXPAA 203
           GP+  + +   G      PP     S     PP  S SP+ PP   P +LS   PA+
Sbjct: 273 GPAPTSVIVTAGRKQPPPPPASPSPSRSSSLPPPASPSPSLPPPASP-SLSLPPPAS 328


>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
            protein.
          Length = 3539

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = +3

Query: 33   GPSXHTFVFXFGSAPLSAPPXXXRSSXRWXXPPGLSSSPAFPPGXLPRALSCSXPAA 203
            GP+  + +   G      PP     S     PP  S SP+ PP   P +LS   PA+
Sbjct: 2540 GPAPTSVIVTAGRKQPPPPPASPSPSRSSSLPPPASPSPSLPPPASP-SLSLPPPAS 2595


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,443,779
Number of Sequences: 53049
Number of extensions: 357030
Number of successful extensions: 1109
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)