Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_G17
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical ... 206 2e-53
AC199170-2|ABO33261.1| 167|Caenorhabditis elegans Hypothetical ... 124 6e-29
Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical pr... 71 8e-13
AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical ... 48 1e-05
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 7.5
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 28 7.5
M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein. 28 7.5
>AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical
protein Y60A3A.9 protein.
Length = 211
Score = 206 bits (502), Expect = 2e-53
Identities = 101/174 (58%), Positives = 118/174 (67%)
Frame = +3
Query: 159 YFHXAXGARXCFXXAXPDXTXVXVXYXVXLYXPKSGGFMQTTPGXGXHVEVRDPNXXILL 338
YFH A + CF PD T V Y V LY P + G+ P G HVEV+DP ++L
Sbjct: 18 YFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDY-PNIGMHVEVKDPEDKVIL 76
Query: 339 SRVYSLEGXXSFTSSTPGEXVICXYSNSXSWFXGSXLXVXLDIQVGXXAVDYANVAXKEK 518
S++Y+ EG +FTS+TPGE VIC YSNS +WF G+ L V LDIQ G A DYA +A K+K
Sbjct: 77 SKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQAGDHAQDYAQIAQKDK 136
Query: 519 LTELQLRIRXLLDQVHXITKEQAYQRQREERFRQTSESTNQRVLWWSLLQTGVL 680
L ELQLRIR LLDQV ITKEQ YQR REERFRQTSESTN RV +WS+ Q VL
Sbjct: 137 LNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRVFYWSIAQVVVL 190
>AC199170-2|ABO33261.1| 167|Caenorhabditis elegans Hypothetical
protein T08D2.1 protein.
Length = 167
Score = 124 bits (300), Expect = 6e-29
Identities = 60/123 (48%), Positives = 75/123 (60%)
Frame = +3
Query: 159 YFHXAXGARXCFXXAXPDXTXVXVXYXVXLYXPKSGGFMQTTPGXGXHVEVRDPNXXILL 338
YFH A + CF PD T V Y V LY P + G+ P G HVEV+DP ++L
Sbjct: 18 YFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDY-PNIGMHVEVKDPEDKVIL 76
Query: 339 SRVYSLEGXXSFTSSTPGEXVICXYSNSXSWFXGSXLXVXLDIQVGXXAVDYANVAXKEK 518
S++Y+ EG +FTS+TPGE VIC YSN+ +WF G+ L V LDIQ G A DYA V + K
Sbjct: 77 SKLYTSEGRFTFTSNTPGEHVICIYSNTTAWFNGAQLRVHLDIQAGDHAQDYAQVEEERK 136
Query: 519 LTE 527
L E
Sbjct: 137 LDE 139
>Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical
protein F47G9.1 protein.
Length = 204
Score = 71.3 bits (167), Expect = 8e-13
Identities = 39/103 (37%), Positives = 58/103 (56%)
Frame = +3
Query: 354 LEGXXSFTSSTPGEXVICXYSNSXSWFXGSXLXVXLDIQVGXXAVDYANVAXKEKLTELQ 533
L+G +FT+ IC ++ + G V L ++ G A +Y ++A EKL L+
Sbjct: 74 LKGKFAFTADEYDIFEICIENHPPAGHPGEKREVSLILKHGVEAKNYDDIAKAEKLKPLE 133
Query: 534 LRIRXLLDQVHXITKEQAYQRQREERFRQTSESTNQRVLWWSL 662
+ +R L D ITK+ A+ RQREE R T+ESTN RVL+ S+
Sbjct: 134 VELRRLEDMADSITKDFAFMRQREEEMRNTNESTNSRVLYLSI 176
>AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical
protein F57B10.5 protein.
Length = 203
Score = 47.6 bits (108), Expect = 1e-05
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +3
Query: 309 VRDPNXXILLSRVYSLEGXXSFTSSTPGEXVICXYSNSXSWFXGSXLXVXLDIQVGXXAV 488
+ DPN +L +F + G C +SN S F S V +D Q G
Sbjct: 60 IEDPNGKVLYKDTKKQYDSINFKAEVEGTYKAC-FSNEFSTF--SHKIVYMDWQFGDQNA 116
Query: 489 DYANVAX-KEKLTELQLRIRXLLDQVHXITKEQAYQRQREERFRQTSESTNQRVLWWSLL 665
+A V +T+L+ + D++ I Q + R RE R+ +E N+RV+ WSL
Sbjct: 117 LHAAVTQGAHAMTQLENYAVAIGDKLRTIDDYQTHHRLREATGRKRAEELNERVMIWSLG 176
Query: 666 QTGVL 680
Q+ V+
Sbjct: 177 QSAVV 181
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 462 DIQVGXXAVDYANVAXKEKLTELQLRIRXLLDQVHXITKEQAYQRQREERFRQ 620
DI A+D+AN A ++ Q IR LDQ+ + + +++R E FR+
Sbjct: 1637 DINELEIALDHANKANEDA----QKNIRRYLDQIRELQQTVDEEQKRREEFRE 1685
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 462 DIQVGXXAVDYANVAXKEKLTELQLRIRXLLDQVHXITKEQAYQRQREERFRQ 620
DI A+D+AN A ++ Q IR LDQ+ + + +++R E FR+
Sbjct: 1637 DINELEIALDHANKANEDA----QKNIRRYLDQIRELQQTVDEEQKRREEFRE 1685
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 462 DIQVGXXAVDYANVAXKEKLTELQLRIRXLLDQVHXITKEQAYQRQREERFRQ 620
DI A+D+AN A ++ Q IR LDQ+ + + +++R E FR+
Sbjct: 1637 DINELEIALDHANKANEDA----QKNIRRYLDQIRELQQTVDEEQKRREEFRE 1685
>M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein.
Length = 273
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 462 DIQVGXXAVDYANVAXKEKLTELQLRIRXLLDQVHXITKEQAYQRQREERFRQ 620
DI A+D+AN A ++ Q IR LDQ+ + + +++R E FR+
Sbjct: 137 DINELEIALDHANKANEDA----QKNIRRYLDQIRELQQTVDEEQKRREEFRE 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,672,296
Number of Sequences: 27780
Number of extensions: 162242
Number of successful extensions: 277
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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