Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_G04
(866 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 56 8e-08
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 56 8e-08
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 50 5e-06
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 44 2e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 44 2e-04
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 42 0.001
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 41 0.003
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 40 0.003
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 34 0.22
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 34 0.22
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 32 0.89
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 32 0.89
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 32 0.89
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 32 0.89
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 31 1.6
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 30 4.7
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 55.6 bits (128), Expect = 8e-08
Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Frame = -3
Query: 741 TLYHLYK-DLPEHIXYPCSLXADDIAVVITKXATLDLNDEINATVSKVIDWMNKNNLKAN 565
TL++++ D+P+ SL ADD AV + ++N + + ++++ + K +K N
Sbjct: 675 TLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKIN 734
Query: 564 LDKTRYIQFYNRHK--FXXXXXXXXXXXXXNECNSITFLGLNVDNQCSWNLHIDITCSKI 391
+KT I F R K + ++I +LG+ D + ++ HI+ T K+
Sbjct: 735 PNKTNAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKV 794
Query: 390 NRFSYALW----RLTKICNLKTALQAYHGYVASNIRYCIPLWGN--SSHINRVFIAQKQC 229
N+ L+ R +K+ ++ + + + Y P+WG +HI ++ I Q +
Sbjct: 795 NKIICTLYPLINRKSKL-SISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKL 853
Query: 228 VRAMCNXXPLTSCK 187
++ + N T+ K
Sbjct: 854 LKLIMNLPYYTNTK 867
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 773 GVPQGSILGPXLFIIY 726
GVPQGS+LGP LF I+
Sbjct: 665 GVPQGSVLGPTLFNIF 680
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 55.6 bits (128), Expect = 8e-08
Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Frame = -3
Query: 741 TLYHLYK-DLPEHIXYPCSLXADDIAVVITKXATLDLNDEINATVSKVIDWMNKNNLKAN 565
TL++++ D+P+ SL ADD AV + ++N + + ++++ + K +K N
Sbjct: 623 TLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKIN 682
Query: 564 LDKTRYIQFYNRHK--FXXXXXXXXXXXXXNECNSITFLGLNVDNQCSWNLHIDITCSKI 391
+KT I F R K + ++I +LG+ D + ++ HI+ T K+
Sbjct: 683 PNKTNAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKV 742
Query: 390 NRFSYALW----RLTKICNLKTALQAYHGYVASNIRYCIPLWGN--SSHINRVFIAQKQC 229
N+ L+ R +K+ ++ + + + Y P+WG +HI ++ I Q +
Sbjct: 743 NKIICTLYPLINRKSKL-SISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKL 801
Query: 228 VRAMCNXXPLTSCK 187
++ + N T+ K
Sbjct: 802 LKLIMNLPYYTNTK 815
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -1
Query: 773 GVPQGSILGPXLFIIY 726
GVPQGS+LGP LF I+
Sbjct: 613 GVPQGSVLGPTLFNIF 628
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 49.6 bits (113), Expect = 5e-06
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 5/175 (2%)
Frame = -3
Query: 741 TLYHLYK-DLPEHIXYPCSLXADDIAVVITKXATLDLNDEINATVSKVIDWMNKNNLKAN 565
TLY +Y D+P + S ADD A++ + + ++ + + W++ +K N
Sbjct: 647 TLYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVN 706
Query: 564 LDKTRYIQF-YNRHKFXXXXXXXXXXXXXNECNSITFLGLNVDNQCSWNLHIDITCSKIN 388
K +++ F NR + + +T+LG+++D + +W HI+ +++
Sbjct: 707 EQKCKHVTFTLNRQ---DCPPLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLK 763
Query: 387 RFSYAL-WRLT--KICNLKTALQAYHGYVASNIRYCIPLWGNSSHINRVFIAQKQ 232
+ L W + +L + Y+ + Y LWGN+S+ N I + Q
Sbjct: 764 LKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQ 818
Score = 33.1 bits (72), Expect = 0.51
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -1
Query: 779 KVGVPQGSILGPXLFIIY 726
+ GVPQGS+LGP L++IY
Sbjct: 635 EAGVPQGSVLGPTLYLIY 652
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 44.4 bits (100), Expect = 2e-04
Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Frame = -3
Query: 738 LYHLYK-DLPEHIXYPCSLXADDIAVVITKXATLDLNDEINATVSKVIDWMNKNNLKANL 562
LY LY D P S ADD A++ + ++ ++ V W+ + N+
Sbjct: 646 LYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINV 705
Query: 561 DKTRYIQFYNRHKFXXXXXXXXXXXXXNECNSITFLGLNVDNQCSWNLHIDITCSKINRF 382
K + + F + + + +T+LG+++D + +W HI+ +
Sbjct: 706 QKCKQVTFTLNKQ--TCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLK 763
Query: 381 SYAL-WRLTKICNLKTALQA--YHGYVASNIRYCIPLWGNSSHINRVFIAQKQ 232
+ L W + L +A Y+ + Y LWGN+S N I + Q
Sbjct: 764 ARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQ 816
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 779 KVGVPQGSILGPXLFIIY 726
+ GVPQGS+LGP L+ +Y
Sbjct: 633 EAGVPQGSVLGPILYTLY 650
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 44.4 bits (100), Expect = 2e-04
Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Frame = -3
Query: 738 LYHLYK-DLPEHIXYPCSLXADDIAVVITKXATLDLNDEINATVSKVIDWMNKNNLKANL 562
LY LY D P S ADD A++ + ++ ++ V W+ + N+
Sbjct: 646 LYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINV 705
Query: 561 DKTRYIQFYNRHKFXXXXXXXXXXXXXNECNSITFLGLNVDNQCSWNLHIDITCSKINRF 382
K + + F + + + +T+LG+++D + +W HI+ +
Sbjct: 706 QKCKQVTFTLNKQ--TCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLK 763
Query: 381 SYAL-WRLTKICNLKTALQA--YHGYVASNIRYCIPLWGNSSHINRVFIAQKQ 232
+ L W + L +A Y+ + Y LWGN+S N I + Q
Sbjct: 764 ARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQ 816
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 779 KVGVPQGSILGPXLFIIY 726
+ GVPQGS+LGP L+ +Y
Sbjct: 633 EAGVPQGSVLGPILYTLY 650
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 41.5 bits (93), Expect = 0.001
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Frame = -3
Query: 681 ADDIAVVITKXATLDLNDEINATVSKVIDWMNKNNLKANLDKTRYIQFYNRHKFXXXXXX 502
ADD+ V D D I + +W + N+ N K+ + F + +
Sbjct: 675 ADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKRR--TPPPV 732
Query: 501 XXXXXXXNECNSITFLGLNVDNQCSWNLHI-DITC---SKINRFSYALWRLTKICNLKTA 334
+ N+ +LG+ +D + +++ H+ DI +K+ + + L +K+ +L
Sbjct: 733 YIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKL-SLSNK 791
Query: 333 LQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCVR 223
L Y +A N +Y +WG + SHI R+ Q + R
Sbjct: 792 LTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVAR 830
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -1
Query: 773 GVPQGSILGPXLFIIY 726
GVPQGS+LGP L+ +Y
Sbjct: 639 GVPQGSVLGPLLYCLY 654
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 40.7 bits (91), Expect = 0.003
Identities = 25/107 (23%), Positives = 43/107 (40%)
Frame = -3
Query: 681 ADDIAVVITKXATLDLNDEINATVSKVIDWMNKNNLKANLDKTRYIQFYNRHKFXXXXXX 502
ADD+A+ +L D N ++ I+W+ K LK KT + +R K
Sbjct: 646 ADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVLLSSR-KSVECMRV 704
Query: 501 XXXXXXXNECNSITFLGLNVDNQCSWNLHIDITCSKINRFSYALWRL 361
++ +LG+ +D + S+ H K + AL R+
Sbjct: 705 EVKGVEIASAETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARI 751
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 40.3 bits (90), Expect = 0.003
Identities = 29/149 (19%), Positives = 63/149 (42%), Gaps = 5/149 (3%)
Frame = -3
Query: 681 ADDIAVVITKXATLDLNDEINATVSKVIDWMNKNNLKANLDKTRYIQFYNRHKFXXXXXX 502
ADD ++I + N ++ + +W + + +L K +++ +
Sbjct: 667 ADDFFLIINFNKNTNTNFNLDNLFDDIENWCSYSGASLSLSKCQHLHICRKRH--CTCKI 724
Query: 501 XXXXXXXNECNSITFLGLNVDNQCSWNLHIDITCSKI-NRFSY--ALWRLTKICNLKTAL 331
S+ LG+ ++N+ WN HI++ K+ N+ + L L CN T L
Sbjct: 725 SCNNFQIPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLL 784
Query: 330 QAYHGYVASNIRYCIPLWGNS--SHINRV 250
+ + + Y + L+G++ S +N++
Sbjct: 785 NVAKATIIAKLEYGLFLYGHAPKSILNKI 813
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 34.3 bits (75), Expect = 0.22
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 806 GFKSSXXYNKVGVPQGSILGPXLFIIY 726
G+KSS GVPQGS+LGP L+ ++
Sbjct: 630 GYKSSIKPIAAGVPQGSVLGPTLYSVF 656
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 34.3 bits (75), Expect = 0.22
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 806 GFKSSXXYNKVGVPQGSILGPXLFIIY 726
G+KSS GVPQGS+LGP L+ ++
Sbjct: 432 GYKSSIKPIAAGVPQGSVLGPTLYSVF 458
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 32.3 bits (70), Expect = 0.89
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 779 KVGVPQGSILGPXLFIIY 726
+ GVPQGSILGP L+ IY
Sbjct: 239 RAGVPQGSILGPVLYSIY 256
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 32.3 bits (70), Expect = 0.89
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 779 KVGVPQGSILGPXLFIIY 726
+ GVPQGSILGP L+ IY
Sbjct: 686 RAGVPQGSILGPVLYSIY 703
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 32.3 bits (70), Expect = 0.89
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 779 KVGVPQGSILGPXLFIIY 726
+ GVPQGSILGP L+ IY
Sbjct: 686 RAGVPQGSILGPVLYSIY 703
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 32.3 bits (70), Expect = 0.89
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 779 KVGVPQGSILGPXLFIIY 726
+ GVPQGSILGP L+ IY
Sbjct: 686 RAGVPQGSILGPVLYSIY 703
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 31.5 bits (68), Expect = 1.6
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 797 SSXXYNKVGVPQGSILGPXLFIIY 726
SS + GVPQGS+LGP L+ +Y
Sbjct: 168 SSDFTIEAGVPQGSVLGPILYTLY 191
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1
Query: 779 KVGVPQGSILGPXLFIIY 726
+ GVPQGS+LGP L+ ++
Sbjct: 638 RAGVPQGSVLGPLLYSVF 655
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,086,642
Number of Sequences: 53049
Number of extensions: 568584
Number of successful extensions: 1014
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -