Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_G04
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    31   0.81 
U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    31   1.4  
AF040641-5|AAB94944.1|  379|Caenorhabditis elegans Hypothetical ...    30   1.9  
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    30   2.5  
Z81537-4|CAB04375.2|  669|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z77662-9|CAB01198.1|  456|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AF025452-3|AAB70939.2|  198|Caenorhabditis elegans Hypothetical ...    28   9.9  

>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
           protein F21E9.1 protein.
          Length = 1170

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 773 GVPQGSILGPXLFIIYI 723
           GVPQGS+ GP LFI++I
Sbjct: 880 GVPQGSVSGPLLFILFI 896


>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -1

Query: 797 SSXXYNKVGVPQGSILGPXLFIIYI 723
           SS  +   GVPQG++L P LF IY+
Sbjct: 68  SSRKFATCGVPQGAVLSPLLFGIYV 92


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 773 GVPQGSILGPXLFIIYIK 720
           GVPQGS++ P LF  Y+K
Sbjct: 532 GVPQGSVISPNLFTFYLK 549


>AF040641-5|AAB94944.1|  379|Caenorhabditis elegans Hypothetical
           protein D1069.4 protein.
          Length = 379

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 63  CIKFDSTRHTXYIIVGAF*QTNNILVYIWMVXLKYYVFGRM 185
           C     T ++ Y++   F +T++   YIW+V LK++V+  M
Sbjct: 77  CDVITMTSYSIYLMRFRFYETDHGYSYIWLVFLKFHVWSSM 117


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -1

Query: 773 GVPQGSILGPXLFIIYI 723
           GVP+GS+ GP LF+I+I
Sbjct: 56  GVPKGSVSGPFLFLIFI 72


>Z81537-4|CAB04375.2|  669|Caenorhabditis elegans Hypothetical
           protein F41D3.4 protein.
          Length = 669

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 19/75 (25%), Positives = 32/75 (42%)
 Frame = -3

Query: 411 DITCSKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNSSHINRVFIAQKQ 232
           +I CSK+ R    L    + C L+ + ++Y    A  I    P+  ++S I  +      
Sbjct: 210 NIGCSKLKRHYKILTDQEEKCKLQESYKSYIFLAALTIMAFFPIPLDASIIRPLVTIGTG 269

Query: 231 CVRAMCNXXPLTSCK 187
           C+   C   P+ S K
Sbjct: 270 CLMLTCEGNPMLSNK 284


>Z77662-9|CAB01198.1|  456|Caenorhabditis elegans Hypothetical
           protein F47B8.10 protein.
          Length = 456

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 560 SKLAFKLFLFIQSMTLLTVAFISSFK 637
           S   +K+FL+I S+ L+ V F+SSF+
Sbjct: 362 SVFGWKVFLYIFSVQLVIVLFVSSFR 387


>AF025452-3|AAB70939.2|  198|Caenorhabditis elegans Hypothetical
           protein B0454.5 protein.
          Length = 198

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 129 NILVYIWMVXLKYYVFGRMVYKKSEXXYCTW 221
           NIL+++W +   Y+VFG    +     YC W
Sbjct: 141 NILIFVWCIFGCYWVFGSWTAR----AYCDW 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,963,338
Number of Sequences: 27780
Number of extensions: 309183
Number of successful extensions: 723
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)