Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_G02
(1070 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 36 0.065
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.065
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.065
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 33 0.26
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 1.1
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 31 1.4
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 31 1.4
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 31 1.4
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 30 2.5
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 2.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.5
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 30 3.2
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 30 3.2
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 3.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 3.2
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 5.7
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 5.7
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 29 5.7
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 5.7
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 29 5.7
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 5.7
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 35.5 bits (78), Expect = 0.065
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 144 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 181
Score = 32.7 bits (71), Expect = 0.46
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGK-XGXRGGXAGAGWXXXGGG 957
G GGG C GC GG G GG G G GGG
Sbjct: 121 GCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGG 159
Score = 32.3 bits (70), Expect = 0.61
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVX-----AXGGKXGXRGGXAGAGWXXXGGG 957
GG GG C GC A GG G GG G G GGG
Sbjct: 40 GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Score = 32.3 bits (70), Expect = 0.61
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 67 GGGGGCGGGGGGC--GGGGGCGGGGGGCGGGGGGCGGG 102
Score = 32.3 bits (70), Expect = 0.61
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVX-----AXGGKXGXRGGXAGAGWXXXGGG 957
GG GG C GC A GG G GG G G GGG
Sbjct: 97 GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGG 139
Score = 31.9 bits (69), Expect = 0.81
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG G GG G GG G G GGG
Sbjct: 136 GGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGG 173
Score = 31.9 bits (69), Expect = 0.81
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGG GC GG G GG G G GGG
Sbjct: 137 GGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 174
Score = 31.9 bits (69), Expect = 0.81
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GG
Sbjct: 151 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGG 188
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 134 GGGGGG-----GCGGGGGGGCGGGGGGCGGGGGGCGGG 166
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 73 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGG--GCGGG 108
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 1046 CXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
C GC GG G GG G G GGG
Sbjct: 61 CGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 90
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAG 984
GGGGG C GC GG G GG G
Sbjct: 24 GGGGGGGGCGGGC--GGGGGCGGGGGCGG 50
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 1046 CXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
C GC GG G GG G G GGG
Sbjct: 118 CGGGCGGGGGGCGGGCGGGGGGGCGGGGGG 147
Score = 28.7 bits (61), Expect = 7.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
G GGG C G GG G GG G G GGG
Sbjct: 148 GCGGGGGGCGGG-GGGCGGGGGGCGGGGGGGCGGGGGG 184
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 35.5 bits (78), Expect = 0.065
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Score = 35.5 bits (78), Expect = 0.065
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 128
Score = 33.9 bits (74), Expect = 0.20
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = -1
Query: 1070 GGGGGXEX----CXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG C GC GG G GG G G GGG
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 108
Score = 33.1 bits (72), Expect = 0.35
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG C GC GG G A G GGG
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGG 63
Score = 32.3 bits (70), Expect = 0.61
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 85 GGGGGCGGGGGGC-GGGGGCGGGGGGCGGGGGGCGGGG 121
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GG
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG 149
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 1067 GGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGG C G GG G GG G G GGG
Sbjct: 132 GGGGGGGCGGGSSGGCGG--GSSGGCGGGGGGGCGGG 166
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCV---XAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGG 100
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GG GG C GG G GG G G GGG
Sbjct: 64 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGG 101
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGG 960
G GGG C G GG G GG G G GG
Sbjct: 102 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGG--KXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G GGG
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGG 158
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 1067 GGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGG C G GG G GG G G GGG
Sbjct: 140 GGGSSGGCGGGSSGGCGGGGG--GGCGGGGGGGCGGG 174
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 35.5 bits (78), Expect = 0.065
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 135
Score = 35.5 bits (78), Expect = 0.065
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGG 142
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 128
Score = 33.9 bits (74), Expect = 0.20
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = -1
Query: 1070 GGGGGXEX----CXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG C GC GG G GG G G GGG
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 108
Score = 33.1 bits (72), Expect = 0.35
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG C GC GG G A G GGG
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGG 63
Score = 32.3 bits (70), Expect = 0.61
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 85 GGGGGCGGGGGGC-GGGGGCGGGGGGCGGGGGGCGGGG 121
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GG
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG 149
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 1067 GGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGG C G GG G GG G G GGG
Sbjct: 132 GGGGGGGCGGGSSGGCGG--GSSGGCGGGGGGGCGGG 166
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCV---XAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGG 100
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GG GG C GG G GG G G GGG
Sbjct: 64 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGG 101
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGG 960
G GGG C G GG G GG G G GG
Sbjct: 102 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
Score = 28.3 bits (60), Expect = 9.9
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGG--KXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G GGG
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGG 158
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 1067 GGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGG C G GG G GG G G GGG
Sbjct: 140 GGGSSGGCGGGSSGGCGGGGG--GGCGGGGGGGCGGG 174
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG G GG G GG G G+ GGG
Sbjct: 234 GGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGG 271
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG G GG+ RGG G G GG
Sbjct: 221 GGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGG 258
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 32.3 bits (70), Expect = 0.61
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
G GGG G GG G RGG G G GGG
Sbjct: 88 GNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG G GG G GG G G GGG
Sbjct: 95 GGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGG 132
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GG GG G GG G GG G G GGG
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGG 119
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 1067 GGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGG G GG G GG G G GGG
Sbjct: 90 GGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical protein
C56A3.1 protein.
Length = 393
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG GC GG G GG G G GGG
Sbjct: 96 GGGGGGCGGGGGCGGGGGGGCGG-GGGGGCGGGGGGGG 132
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGG GC GG G GG G G+ G G
Sbjct: 104 GGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSG 141
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 1067 GGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGG C G GG G GG G G GGG
Sbjct: 86 GGGG---CGGGGCGGGGGGCGGGGGCGGGGGGGCGGG 119
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 1067 GGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGG GC G G GG G G GGG
Sbjct: 91 GGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGG 127
Score = 28.7 bits (61), Expect = 7.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
G GGG C G GG G GG G G GGG
Sbjct: 94 GCGGGGGGCGGG-GGCGGGGGGGCGGGGGGGCGGGGGG 130
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGG 960
GGGGG G GG G RGG G G GG
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGG 708
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGG 960
GGGGG G GG G RGG G G GG
Sbjct: 713 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGG 749
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGG 960
GGGGG G GG G RGG G G GG
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGG 708
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GG GG G GG+ G GG G GW GGG
Sbjct: 56 GGWGGRGGWGRGGGRGYGGRGGGWGGRGG-GWGRGGGG 92
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG G GG G GG G G GGG
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGG 91
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 1067 GGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGG G GG G GG G G GG
Sbjct: 339 GGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGG 375
Score = 29.1 bits (62), Expect = 5.7
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG G A G G GG GAG GGG
Sbjct: 330 GGGGGGYSTGGGGGRADSG--GAAGGAGGAGGYSGGGG 365
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG G GG G GG G GGG
Sbjct: 331 GGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGG 368
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical protein
T28C6.1 protein.
Length = 281
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGA---GWXXXGG 960
GGGGG G GG+ G +GG G GW GG
Sbjct: 195 GGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGG 234
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical protein
F07C4.7 protein.
Length = 180
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GG GG G GG+ G GG G G GGG
Sbjct: 116 GGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGG 153
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GG GG G GG+ G GG G G GG
Sbjct: 96 GGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGG 133
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 3.2
Identities = 23/80 (28%), Positives = 23/80 (28%)
Frame = -2
Query: 1024 RXGGXGXAXGXXREXVGXXRGGVLXCGXRRASXWGGGXXAXGREXXRGGXEXREGXWSXL 845
R GG G G G G G R WGG G GG G W
Sbjct: 39 RWGGGGGPGGWGNNGGGGWGRG----GGRGGGDWGGNNGGGGNWGGNGGG---RGDWGGN 91
Query: 844 GPXGXXEKGDKKWXGEXVXG 785
G G G W G G
Sbjct: 92 GGGGRGGGGRGDWGGNNNGG 111
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGG G G GG G GG G G+ GGG
Sbjct: 90 GGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGG 127
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.1 bits (62), Expect = 5.7
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXR----GGXAGAGWXXXGGG 957
GGGG G A GG G GG G GW GGG
Sbjct: 225 GGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGG 266
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXRGGXAGAGWXXXGGG 957
GGGGG G GG G RGG G G+ GG
Sbjct: 8 GGGGGFRGGRGG--GGGGGFRGGRGGDRGGGFRGGRGG 43
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 29.1 bits (62), Expect = 5.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 1019 GGKXGXRGGXAGAGWXXXGGG 957
GG+ G GG G GW GGG
Sbjct: 209 GGQGGYGGGNYGGGWGQQGGG 229
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.1 bits (62), Expect = 5.7
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXR----GGXAGAGWXXXGGG 957
GGGG G A GG G GG G GW GGG
Sbjct: 187 GGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGG 228
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.1 bits (62), Expect = 5.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 1019 GGKXGXRGGXAGAGWXXXGGG 957
GG+ G GG G GW GGG
Sbjct: 247 GGQGGYGGGNYGGGWGQQGGG 267
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.1 bits (62), Expect = 5.7
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = -1
Query: 1070 GGGGGXEXCXXGCVXAXGGKXGXR----GGXAGAGWXXXGGG 957
GGGG G A GG G GG G GW GGG
Sbjct: 225 GGGGWGGPAQRGGPGAYGGPGGGGQGGYGGDYGGGWGQQGGG 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,879,524
Number of Sequences: 27780
Number of extensions: 80503
Number of successful extensions: 837
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2866653212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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