Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_G01
         (857 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69360-4|CAC42291.2|  732|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z69360-3|CAA93286.2|  369|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z69360-2|CAA93285.2|  780|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>Z69360-4|CAC42291.2|  732|Caenorhabditis elegans Hypothetical
           protein F25H8.5c protein.
          Length = 732

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = -3

Query: 474 LPMNATPXDLEXYP*VXAPTCSQPEPSYTLPLPPTRKRGSXXPVLQG 334
           LP    P   + Y     P C +P+P    P P  ++ G   P  +G
Sbjct: 102 LPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGGCLPSPRG 148


>Z69360-3|CAA93286.2|  369|Caenorhabditis elegans Hypothetical
           protein F25H8.5b protein.
          Length = 369

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = -3

Query: 474 LPMNATPXDLEXYP*VXAPTCSQPEPSYTLPLPPTRKRGSXXPVLQG 334
           LP    P   + Y     P C +P+P    P P  ++ G   P  +G
Sbjct: 102 LPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGGCLPSPRG 148


>Z69360-2|CAA93285.2|  780|Caenorhabditis elegans Hypothetical
           protein F25H8.5a protein.
          Length = 780

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = -3

Query: 474 LPMNATPXDLEXYP*VXAPTCSQPEPSYTLPLPPTRKRGSXXPVLQG 334
           LP    P   + Y     P C +P+P    P P  ++ G   P  +G
Sbjct: 102 LPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGGCLPSPRG 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,711,697
Number of Sequences: 27780
Number of extensions: 182267
Number of successful extensions: 487
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)