Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_F22
(853 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 42 1e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 39 0.001
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.001
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.004
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.006
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.48
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 0.84
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.1
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 1.5
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 4.5
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 5.9
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 7.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 8.6
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 41.9 bits (94), Expect = 1e-04
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 699 PVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSPXPP 839
P P + + P S P P PPP P P P+P PP PS PP
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAP----PIPSKAPPIPSSLPP 173
Score = 37.5 bits (83), Expect = 0.002
Identities = 22/67 (32%), Positives = 25/67 (37%)
Frame = +3
Query: 639 PXXXPXXXSXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPP 818
P P S PP P + P+P S P PP P P + P LP PP
Sbjct: 140 PTSAPPRPSIPPPS-PASAPPIPSKAPPIPSSLP--PPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 819 XPSPXPP 839
P PP
Sbjct: 197 MPPKVPP 203
Score = 34.7 bits (76), Expect = 0.017
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +3
Query: 651 PXXXSXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSP 830
P S PP +P + P+P + P + P +P PP P P+P PP P
Sbjct: 152 PSPASAPP--IPSKAPPIPSSL--PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLS 207
Query: 831 XPP 839
P
Sbjct: 208 QAP 210
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +3
Query: 738 PXSPPXP-PPXPXRXPXLGAPLPXXPPPXPSPXPP 839
P +P P P R P P P PPP P+ PP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP 159
Score = 30.3 bits (65), Expect = 0.36
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 723 PXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSPXPP 839
P P S PP P + P P PP PS PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP 166
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = +3
Query: 684 PFXSSPV-PXAXVXPXXSXPXSPPXP---PPXPXRXPXLGAPLPXXPPPXPSPXPPXXP 848
P + PV P + P S P PP P PP P P P PPP P+ P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 30.3 bits (65), Expect = 0.36
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = +3
Query: 636 TPXXXPXXXSXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPP 815
TP P + P P + P P V P S P P PP P P + P P
Sbjct: 1689 TPPVRPQSAAPPQMSAP--TPPPPPMSVPPPPSAPPMPAGPPSAPP-PPLPASSAPSVPN 1745
Query: 816 P 818
P
Sbjct: 1746 P 1746
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/67 (26%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +3
Query: 651 PXXXSXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPS- 827
P P P P P V P P P P AP+ PP P+
Sbjct: 1433 PTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNV 1492
Query: 828 PXPPXXP 848
P P P
Sbjct: 1493 PVPSMIP 1499
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.3 bits (85), Expect = 0.001
Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 651 PXXXSXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPP-PXPS 827
P S PP P S P P A P +PP PP P P L A +P PP P +
Sbjct: 418 PTPPSLPPSAPP--SLP-PSAPPSLPMGAPAAPPLPPSAPI-APPLPAGMPAAPPLPPAA 473
Query: 828 PXPPXXP 848
P PP P
Sbjct: 474 PAPPPAP 480
Score = 35.1 bits (77), Expect = 0.013
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +3
Query: 663 SXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPL-PXXPPPXPSP 830
S PP +P S+P P P SPP PP P + + PP P P
Sbjct: 239 SRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 33.5 bits (73), Expect = 0.039
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = +3
Query: 663 SXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSPXPP 839
S PP P P A P S P +PP P P P A P P P+P P
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPP-SAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 33.1 bits (72), Expect = 0.051
Identities = 25/70 (35%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Frame = +3
Query: 636 TPXXXPXXXSXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLP---X 806
TP P S PP LP + P P S P PP P P PLP
Sbjct: 419 TPPSLPP--SAPPS-LPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP-AAPPLPPAAP 474
Query: 807 XPPPXPSPXP 836
PPP P+P P
Sbjct: 475 APPPAPAPAP 484
Score = 31.1 bits (67), Expect = 0.21
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +3
Query: 699 PVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSPXPPXXP 848
PVP P + P PP PP PLP P P P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP-PLPAGMP 464
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 744 SPPXPPPXPXRXPXLGAPLPXXPPPXPSPXP 836
+PP PP P P P P P P P P
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = +3
Query: 663 SXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXL--GAPLPXXPPPXPSP 830
S PP LP SS V A + P PP P P + G+ PPP P P
Sbjct: 288 SKPP--LPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 744 SPPXPPPXPXRXPXLGAPLPXXPPPXPSPXPP 839
S P PPP P PLP P P PP
Sbjct: 335 SLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 693 SSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSPXPPXXP 848
S+P P S P PP P + P P PP P PP P
Sbjct: 386 SNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP-PSLPPSAPPSLPPSAP 436
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = +3
Query: 651 PXXXSXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSP 830
P + PP +P + PVP + P +PP P P + AP P P PS
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSS----SGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Query: 831 XPP 839
PP
Sbjct: 1091 IPP 1093
Score = 33.5 bits (73), Expect = 0.039
Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Frame = +3
Query: 651 PXXXSXPPXXLPFXSSPV---PXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPX 821
P PP P ++P P V P + +PP P P P P+P PP
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP---VPVPSGAPPV 1142
Query: 822 PSPXPPXXP 848
P P P
Sbjct: 1143 PKPSVAAPP 1151
Score = 33.5 bits (73), Expect = 0.039
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 669 PPXXLPFXSSPVPXAXVX--PXXSXPXSPPXPPPXPXRXPXLGAPLPXXPP-PXPSPXPP 839
PP +P + PVP V P + +PP P P P + AP PP P P+ P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP-SVAAPPVPAPSSGIPPVPKPAAGVP 1189
Query: 840 XXP 848
P
Sbjct: 1190 PVP 1192
Score = 32.7 bits (71), Expect = 0.068
Identities = 24/66 (36%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Frame = +3
Query: 669 PPXXLPFXSSPVPXAXVX-PXXSXPXS--PPXPPPXPXRXPXLGAPLPXXPPPXPSP--- 830
PP P + PVP V P P S PP P P P P P PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP---VPPPSEAPPVPKPSVG 1206
Query: 831 XPPXXP 848
PP P
Sbjct: 1207 VPPVPP 1212
Score = 31.5 bits (68), Expect = 0.16
Identities = 24/71 (33%), Positives = 26/71 (36%)
Frame = +3
Query: 636 TPXXXPXXXSXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPP 815
T P S PP +P SS P A P P S P P P + AP P
Sbjct: 1039 TAPPVPIPTSTPP--VPKSSSGAPSA--PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV 1094
Query: 816 PXPSPXPPXXP 848
P PS P P
Sbjct: 1095 PKPSVAAPPVP 1105
Score = 31.5 bits (68), Expect = 0.16
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +3
Query: 669 PPXXLPFXS-SPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPP-PXPSPXPP 839
PP P + PVP P P P P P P + P PP P PS PP
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 31.5 bits (68), Expect = 0.16
Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
Frame = +3
Query: 651 PXXXSXPPXXLPFXSS---PVPXAXVXPXXSXPXS-PPXPPP---XPXRXPXLGAPLPXX 809
P PP P ++ P P + + P PP PPP P P +G P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP-PVP 1211
Query: 810 PPPXPSPXP 836
PP P P
Sbjct: 1212 PPSTAPPVP 1220
Score = 31.1 bits (67), Expect = 0.21
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +3
Query: 669 PPXXLPFXSSP-VPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPS-PXPPX 842
PP LP +P +P P P S P P P P+P PS P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 843 XP 848
P
Sbjct: 1082 AP 1083
Score = 31.1 bits (67), Expect = 0.21
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +3
Query: 669 PPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRX-PXLGAPLPXXPP-PXPSPXPP 839
PP P + PVP V P S P P P P + P PP P PS P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 30.7 bits (66), Expect = 0.27
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +3
Query: 699 PVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSPXPPXXP 848
P P A V P +PP P P P P P PP P+P P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPP---VPPPSTAPPVPTPSAGLPP 1228
Score = 29.9 bits (64), Expect = 0.48
Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Frame = +3
Query: 636 TPXXXPXXXSXP--PXXLPFXSSPV-PXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPX 806
+P P P P P +SP P A V P P P P + P
Sbjct: 981 SPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTA 1040
Query: 807 XPPPXPSPXPP 839
P P P+ PP
Sbjct: 1041 PPVPIPTSTPP 1051
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = +3
Query: 669 PPXXLPFXSSP-VPXAXVXPXXSXPXS-PPXPPPXPXRXPXLGAPLPXXPPPXPSPXPP 839
PP P P +P P P PP P P P + P P PS PP
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 36.7 bits (81), Expect = 0.004
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -1
Query: 853 GXGXXGGXGXGXGGGXXGRGAPKXGXRXGXGGGXGGDXG 737
G G G G G GG GRG + G R G GG GG G
Sbjct: 29 GGGRGGARGGGRGGARGGRGG-RGGARGGRGGSSGGRGG 66
Score = 34.7 bits (76), Expect = 0.017
Identities = 25/67 (37%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = -1
Query: 835 GXGXGXGGGXXGRGAPKXGXRXGXGGGXGGDXGXXKXGXTXA-XGTGEEXNGRXXGGXXX 659
G G GG GRG G R G GGG GG G + G G G GR GG
Sbjct: 6 GSRGGRGGSRGGRGG-FNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGR--GGSSG 62
Query: 658 XXGXXXG 638
G G
Sbjct: 63 GRGGAKG 69
Score = 33.5 bits (73), Expect = 0.039
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = -1
Query: 847 GXXGGXGXGXGGGXXGRGAPKXGXRXGXGGGXGGDXGXXKXGXTXAXGTGEEXNGR 680
G GG G GG GRG G GGG GG G G G GR
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGR 64
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1
Query: 853 GXGXXGGXGXGXGGGXXGRGAPKXGXR 773
G G GG G GG GRG K G +
Sbjct: 46 GRGGRGGARGGRGGSSGGRGGAKGGAK 72
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 847 GXXGGXGXGXGGGXXGRGAPKXGXRXGXGGGXGG 746
G GG G G GG GRG G G GG GG
Sbjct: 42 GARGGRG-GRGGARGGRG----GSSGGRGGAKGG 70
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Frame = +3
Query: 723 PXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPP-----XPSPXPPXXP 848
P P P P P P P +G P P PPP P P PP P
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.1 bits (77), Expect = 0.013
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +3
Query: 669 PPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPS 827
PP +P P P + P PPP P G P P PPP S
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 32.3 bits (70), Expect = 0.090
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = +3
Query: 744 SPPXPPPXPXRXPXLGAPLPXXPPPXP---SPXPPXXP 848
SPP PPP AP+P PPP P P PP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIP-VPPPAPIMGGPPPPPPP 767
Score = 26.6 bits (56), Expect = 4.5
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +3
Query: 639 PXXXPXXXSXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPP 818
P P PP P P P P + P PPP P G P P
Sbjct: 742 PTPAPAPIPVPPPA-PIMGGPPPPP---PPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Query: 819 XPSPXP 836
P P
Sbjct: 798 QAEPEP 803
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 29.9 bits (64), Expect = 0.48
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +3
Query: 699 PVPXAXVXPXXSXPXSP-PXPPPXPXRXPXLGAPLPXXPPPXPSPXP 836
P+P P P P P PP P P PLP PP P P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDE-PVPEEPLPGEPPLPNEPVP 147
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +3
Query: 684 PFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSPXP 836
P + VP + P P P P P P+P P P P P
Sbjct: 92 PLLNELVPEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +3
Query: 723 PXXSXPXSPPXPPPXPXRXPXLG-APLPXXP-PPXPSPXPPXXP 848
P P PP P P G PLP P P P P P P
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/44 (27%), Positives = 15/44 (34%)
Frame = +3
Query: 672 PXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLP 803
P P + PVP + P P P P P P+P
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.1 bits (62), Expect = 0.84
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 853 GXGXXGGXGX-GXGGGXXGRGAPKXGXRXGXGGGXGGD 743
G G GG G G GG GRG G G GG G+
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGN 483
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +3
Query: 684 PFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSPXPPXXP 848
P P P S P S PPP + P AP P P PP P
Sbjct: 143 PASQEPSASGVNAPTVSAPNSMVSPPPS-FQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 756 PPPXPXRXPXLGAPLPXXPPPXPSPXPP 839
P P P PLP PPP P PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Frame = +3
Query: 669 PPXXLPFXSSPVPXAXVXPXXSXPXSPPXPP--PXPXRXPX-LGAPLPXXPPPXPSPXPP 839
PP P + P+P P + P P P R LG+ + PPP PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
Query: 840 XXP 848
P
Sbjct: 284 RPP 286
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 738 PXSPPXPPPXPXRXPXLGAPLPXXPPPXP 824
P +PP PPP P P P PPP P
Sbjct: 6 PGNPPPPPPPPGFEP----PSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 732 SXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSP 830
S P P PPP P G P PPP P P
Sbjct: 3 SLPPGNPPPPPPPP-----GFEPPSQPPPPPPP 30
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = +3
Query: 663 SXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSPXPPX 842
S PP P S V + + P + P P P P P AP P P P P P P
Sbjct: 459 SLPPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLP---PTTFAP-PGVPLP-PIPGAPG 513
Query: 843 XP 848
P
Sbjct: 514 MP 515
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/63 (30%), Positives = 23/63 (36%)
Frame = +3
Query: 651 PXXXSXPPXXLPFXSSPVPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPSP 830
P + P LP P+P A P + PP PP P + AP P P P
Sbjct: 495 PTTFAPPGVPLP----PIPGAPGMPNLNMS-QPPMVPPGMALPPGMPAPFPGYPAVPAMP 549
Query: 831 XPP 839
P
Sbjct: 550 GIP 552
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 853 GXGXXGGXGXGXGGGXXGRGAP 788
G G GG G GGG G G P
Sbjct: 250 GLGGFGGGPGGFGGGPGGHGGP 271
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +3
Query: 732 SXPXSPPXPPPX--PXRXPXLGAPLPXXPPPXP 824
S +PP PPP P P AP PP P
Sbjct: 1877 SNQAAPPPPPPMALPKAGPPSAAPTSALPPAGP 1909
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 723 PXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXP 824
P P P PP R P + A P P P P
Sbjct: 1043 PSALSPSVTPQLPPVSSRLPPVSATRPQIPQPPP 1076
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/53 (30%), Positives = 16/53 (30%), Gaps = 4/53 (7%)
Frame = +3
Query: 702 VPXAXVXPXXSXPXSPPXPPPXPXRXPXLGAPLPXXPPPXPS----PXPPXXP 848
VP P S P PP P P P P P P PP P
Sbjct: 559 VPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAP 611
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 22.6 bits (46), Expect(2) = 8.6
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 798 LPXXPPPXPSPXP 836
+P PPP P P P
Sbjct: 941 MPAFPPPPPPPPP 953
Score = 21.0 bits (42), Expect(2) = 8.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 744 SPPXPPPXPXR 776
+PP PPP P +
Sbjct: 906 TPPPPPPLPVK 916
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,167,302
Number of Sequences: 5004
Number of extensions: 10991
Number of successful extensions: 227
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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