Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_F21
         (862 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0317 - 16328558-16328612,16328698-16328901,16329794-163300...   161   9e-40
01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419          160   2e-39
04_04_1155 - 31308704-31309051,31309301-31309451,31309532-313097...    29   4.8  

>11_04_0317 -
           16328558-16328612,16328698-16328901,16329794-16330065,
           16330152-16330220
          Length = 199

 Score =  161 bits (390), Expect = 9e-40
 Identities = 76/99 (76%), Positives = 84/99 (84%)
 Frame = +3

Query: 297 YAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLT 476
           +A  LPH+AGRY+ KRFRKAQCPIVERLTNSLMMHGRNNGKK+MAVRIVKHA EIIHLLT
Sbjct: 40  HATYLPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLT 99

Query: 477 GENPLXVLVTXIIXSGXREDSXRIGRAGTVRRQAVDVYP 593
             NP+ V+V  II SG RED+ RIG AG VRRQAVD+ P
Sbjct: 100 DANPIQVIVDAIINSGPREDATRIGSAGAVRRQAVDISP 138



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 24/44 (54%), Positives = 27/44 (61%)
 Frame = +1

Query: 607 QXIWXLCTGXXEAXXRNIKXIAECVXDELINXX*GLFXS*AXKK 738
           Q I+ L TG  E+  RNIK IAEC+ DELIN   G   S A KK
Sbjct: 144 QAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKK 187


>01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419
          Length = 200

 Score =  160 bits (388), Expect = 2e-39
 Identities = 75/99 (75%), Positives = 84/99 (84%)
 Frame = +3

Query: 297 YAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLT 476
           +A  LPH+AGRY+ KRFRKAQCP+VERLTNSLMMHGRNNGKK+MAVRIVKHA EIIHLLT
Sbjct: 41  HATYLPHTAGRYSAKRFRKAQCPLVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLT 100

Query: 477 GENPLXVLVTXIIXSGXREDSXRIGRAGTVRRQAVDVYP 593
             NP+ V+V  II SG RED+ RIG AG VRRQAVD+ P
Sbjct: 101 DANPIQVIVDAIINSGPREDATRIGSAGAVRRQAVDISP 139



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 24/44 (54%), Positives = 27/44 (61%)
 Frame = +1

Query: 607 QXIWXLCTGXXEAXXRNIKXIAECVXDELINXX*GLFXS*AXKK 738
           Q I+ L TG  E+  RNIK IAEC+ DELIN   G   S A KK
Sbjct: 145 QAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKK 188


>04_04_1155 -
           31308704-31309051,31309301-31309451,31309532-31309763,
           31309854-31310064,31310304-31310422,31310507-31310581,
           31310789-31310990,31311075-31311454,31311569-31311633,
           31311735-31311779,31312166-31312231,31312667-31312741,
           31313022-31313093,31313659-31313727,31313813-31313884,
           31313995-31314066,31314441-31314512,31314597-31314668,
           31315091-31315162,31315279-31315474,31316094-31316202
          Length = 924

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = -2

Query: 432 RPSVFCHCSDRASLESL*GAPRLGTGLYGNACVHTCQLNEVXILRTXSLTE 280
           RP+VF +   R++ E+   + RLG G YG   V+  +LN+  ++    L++
Sbjct: 579 RPNVFSYSELRSATENFSSSNRLGEGGYG--AVYKGKLNDGRVVAVKQLSQ 627


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,057,538
Number of Sequences: 37544
Number of extensions: 214232
Number of successful extensions: 365
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)