Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_F21
(862 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 184 3e-46
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 184 3e-46
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 184 3e-46
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 184 3e-46
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 180 6e-45
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 3e-18
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 51 5e-06
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 34 0.58
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 5.4
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 5.4
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 5.4
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 184 bits (449), Expect = 3e-46
Identities = 90/111 (81%), Positives = 94/111 (84%)
Frame = +3
Query: 261 VSAGXXFPLKKXYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 440
+S +K+ YAK LPHSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRI
Sbjct: 33 ISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRI 92
Query: 441 VKHAFEIIHLLTGENPLXVLVTXIIXSGXREDSXRIGRAGTVRRQAVDVYP 593
VKHAFEIIHLLTGENPL VLV II SG REDS RIGRAGTVRRQAVDV P
Sbjct: 93 VKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 54.0 bits (124), Expect = 7e-07
Identities = 34/67 (50%), Positives = 36/67 (53%)
Frame = +1
Query: 538 RXGSVVRVQFVVKPLMFTLXXSXQXIWXLCTGXXEAXXRNIKXIAECVXDELINXX*GLF 717
R G+V R V PL Q IW LCTG EA RNIK IAEC+ DELIN G
Sbjct: 130 RAGTVRRQAVDVSPLRRV----NQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 185
Query: 718 XS*AXKK 738
S A KK
Sbjct: 186 NSYAIKK 192
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 184 bits (449), Expect = 3e-46
Identities = 90/111 (81%), Positives = 94/111 (84%)
Frame = +3
Query: 261 VSAGXXFPLKKXYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 440
+S +K+ YAK LPHSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRI
Sbjct: 33 ISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRI 92
Query: 441 VKHAFEIIHLLTGENPLXVLVTXIIXSGXREDSXRIGRAGTVRRQAVDVYP 593
VKHAFEIIHLLTGENPL VLV II SG REDS RIGRAGTVRRQAVDV P
Sbjct: 93 VKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 54.0 bits (124), Expect = 7e-07
Identities = 34/67 (50%), Positives = 36/67 (53%)
Frame = +1
Query: 538 RXGSVVRVQFVVKPLMFTLXXSXQXIWXLCTGXXEAXXRNIKXIAECVXDELINXX*GLF 717
R G+V R V PL Q IW LCTG EA RNIK IAEC+ DELIN G
Sbjct: 130 RAGTVRRQAVDVSPLRRV----NQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 185
Query: 718 XS*AXKK 738
S A KK
Sbjct: 186 NSYAIKK 192
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 184 bits (449), Expect = 3e-46
Identities = 90/111 (81%), Positives = 94/111 (84%)
Frame = +3
Query: 261 VSAGXXFPLKKXYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 440
+S +K+ YAK LPHSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRI
Sbjct: 33 ISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRI 92
Query: 441 VKHAFEIIHLLTGENPLXVLVTXIIXSGXREDSXRIGRAGTVRRQAVDVYP 593
VKHAFEIIHLLTGENPL VLV II SG REDS RIGRAGTVRRQAVDV P
Sbjct: 93 VKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 51.6 bits (118), Expect = 4e-06
Identities = 33/67 (49%), Positives = 35/67 (52%)
Frame = +1
Query: 538 RXGSVVRVQFVVKPLMFTLXXSXQXIWXLCTGXXEAXXRNIKXIAECVXDELINXX*GLF 717
R G+V R V PL Q IW LCTG EA RNIK IAEC+ DELIN G
Sbjct: 130 RAGTVRRQAVDVSPLRRV----NQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 185
Query: 718 XS*AXKK 738
A KK
Sbjct: 186 NFYAIKK 192
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 184 bits (449), Expect = 3e-46
Identities = 90/111 (81%), Positives = 94/111 (84%)
Frame = +3
Query: 261 VSAGXXFPLKKXYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 440
+S +K+ YAK LPHSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRI
Sbjct: 33 ISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRI 92
Query: 441 VKHAFEIIHLLTGENPLXVLVTXIIXSGXREDSXRIGRAGTVRRQAVDVYP 593
VKHAFEIIHLLTGENPL VLV II SG REDS RIGRAGTVRRQAVDV P
Sbjct: 93 VKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 54.0 bits (124), Expect = 7e-07
Identities = 34/67 (50%), Positives = 36/67 (53%)
Frame = +1
Query: 538 RXGSVVRVQFVVKPLMFTLXXSXQXIWXLCTGXXEAXXRNIKXIAECVXDELINXX*GLF 717
R G+V R V PL Q IW LCTG EA RNIK IAEC+ DELIN G
Sbjct: 130 RAGTVRRQAVDVSPLRRV----NQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 185
Query: 718 XS*AXKK 738
S A KK
Sbjct: 186 NSYAIKK 192
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 180 bits (438), Expect = 6e-45
Identities = 88/111 (79%), Positives = 92/111 (82%)
Frame = +3
Query: 261 VSAGXXFPLKKXYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 440
+S +K+ YAK LPHSAGRYA FRKAQCPIVERLTNS+MMHGRNNGKKLM VRI
Sbjct: 33 ISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRI 92
Query: 441 VKHAFEIIHLLTGENPLXVLVTXIIXSGXREDSXRIGRAGTVRRQAVDVYP 593
VKHAFEIIHLLTGENPL VLV II SG REDS RIGRAGTVRRQAVDV P
Sbjct: 93 VKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSP 143
Score = 54.0 bits (124), Expect = 7e-07
Identities = 34/67 (50%), Positives = 36/67 (53%)
Frame = +1
Query: 538 RXGSVVRVQFVVKPLMFTLXXSXQXIWXLCTGXXEAXXRNIKXIAECVXDELINXX*GLF 717
R G+V R V PL Q IW LCTG EA RNIK IAEC+ DELIN G
Sbjct: 130 RAGTVRRQAVDVSPLRRV----NQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 185
Query: 718 XS*AXKK 738
S A KK
Sbjct: 186 NSYAIKK 192
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 91.9 bits (218), Expect = 3e-18
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +3
Query: 354 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLXVLV 503
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLV 50
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 51.2 bits (117), Expect = 5e-06
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = +1
Query: 613 IWXLCTGXXEAXXRNIKXIAECVXDELINXX*GLFXS*AXKK 738
IW LCTG EA RNIK IAEC+ DELIN G S A KK
Sbjct: 2 IWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKK 43
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 34.3 bits (75), Expect = 0.58
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 417 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 325
C C + ++ E G R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 417 CHCSDRASLESL*GAPRLGTGLYGNACVH 331
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 417 CHCSDRASLESL*GAPRLGTGLYGNACVH 331
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 5.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 417 CHCSDRASLESL*GAPRLGTGLYGNACVH 331
C C + ++ E G R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,066,285
Number of Sequences: 237096
Number of extensions: 1114061
Number of successful extensions: 2479
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2477
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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