Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_F21
         (862 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   171   7e-43
Z81050-3|CAB02849.1|  291|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  171 bits (415), Expect = 7e-43
 Identities = 83/111 (74%), Positives = 91/111 (81%)
 Frame = +3

Query: 261 VSAGXXFPLKKXYAKXLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 440
           +S     P+K+  AK LPHSAGR+  +RFRKA CPIVERL NSLMMHGRNNGKKLM VRI
Sbjct: 39  ISLVDYIPVKEKSAKYLPHSAGRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRI 98

Query: 441 VKHAFEIIHLLTGENPLXVLVTXIIXSGXREDSXRIGRAGTVRRQAVDVYP 593
           VKHAFEII+LLTGENP+ VLV  +I SG REDS RIGRAGTVRRQAVDV P
Sbjct: 99  VKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGRAGTVRRQAVDVAP 149



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 33/67 (49%), Positives = 36/67 (53%)
 Frame = +1

Query: 538 RXGSVVRVQFVVKPLMFTLXXSXQXIWXLCTGXXEAXXRNIKXIAECVXDELINXX*GLF 717
           R G+V R    V PL        Q IW LCTG  EA  RN+K IAEC+ DELIN   G  
Sbjct: 136 RAGTVRRQAVDVAPLRRV----NQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSS 191

Query: 718 XS*AXKK 738
            S A KK
Sbjct: 192 NSYAIKK 198


>Z81050-3|CAB02849.1|  291|Caenorhabditis elegans Hypothetical
           protein C50B6.4 protein.
          Length = 291

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = -1

Query: 193 GLXXRXGXHNHAAXXGDGGXPXRXGQDGDXEMTKEKGEPXTG 68
           G   + G    A   GD G P   GQDG      + G+  TG
Sbjct: 160 GQGGQPGPAGPAGPAGDAGAPGAPGQDGQPGAPGQDGQRSTG 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,889,482
Number of Sequences: 27780
Number of extensions: 187228
Number of successful extensions: 600
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)