Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_F20
         (1063 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...    41   0.001
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...    34   0.17 
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...    32   0.67 
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...    31   2.0  

>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +1

Query: 616 LGGXXIXGWXXVESXKKEIGLWFKXKEVVGWXXXNEKWVY 735
           +G   I G    E+ K EIGLWF+ +E+V +    EKW+Y
Sbjct: 153 VGRNIIHGSDGPETAKAEIGLWFEPRELVSYTSNEEKWIY 192


>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 616 LGGXXIXGWXXVESXKKEIGLWFKXKEVVGWXXXNEKWVYE 738
           +G   I G   VE+ +KEI LWF  + +  W      W+YE
Sbjct: 111 IGRNVIHGSDSVENARKEIALWF-PEGIAEWRSNQHPWIYE 150


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score = 32.3 bits (70), Expect = 0.67
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 613 KLGGXXIXGWXXVESXKKEIGLWFKXKEVVGWXXXNEKWVYE 738
           ++G   I G   V++ KKEI LWF  + +  W      W+YE
Sbjct: 108 EVGRNVIHGSDSVDNGKKEIALWF-PEGLAEWRSNLHPWIYE 148


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 619 GGXXIXGWXXVESXKKEIGLWFKXKEVVGWXXXNEKWVYE 738
           G   + G    ++ K+EI LWFK  E+  W      W+ E
Sbjct: 111 GRNVVHGSDSPDNGKREIALWFKEGELCEWESVLTPWLVE 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,675,425
Number of Sequences: 37544
Number of extensions: 86943
Number of successful extensions: 108
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3152842920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)