Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_F14
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical ...    31   0.83 
Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical pr...    30   2.5  

>AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical
           protein T09A12.5 protein.
          Length = 63

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 227 KLXRKKXPNILWXPGLXALXIXXVCGSAVFQIIQSIRV 340
           K    K P   W   L  L I  VCGSA+F++I+ I+V
Sbjct: 29  KTNESKFPTSQW---LIGLFIFVVCGSAIFEVIRYIKV 63


>Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical
           protein F59F4.2 protein.
          Length = 65

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 266 PGLXALXIXXVCGSAVFQIIQSIRV 340
           P L  L +  VCGSAVF+II+ +++
Sbjct: 39  PWLIGLFVFVVCGSAVFEIIRYVKM 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,882,488
Number of Sequences: 27780
Number of extensions: 162675
Number of successful extensions: 178
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)