Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_F13
(982 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.34
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 27 0.34
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 2.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 2.4
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 3.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 5.6
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 5.6
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 5.6
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 5.6
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 5.6
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 5.6
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 5.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 5.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 5.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 5.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 5.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 5.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 5.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 5.6
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 5.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 5.6
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.34
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 932 PPXXXPPPPPPXPPXP 979
PP PPPPPP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 24.2 bits (50), Expect = 1.8
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 908 PPRPXXPPPPXXXPPP 955
PP+P PPPP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.0 bits (47), Expect = 4.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 926 PPPPXXXPPPPPPXPP 973
PP P PPPP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 26.6 bits (56), Expect = 0.34
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 908 PPRPXXPPPPXXXPPPPPPXPP 973
PP P PPP P PP P
Sbjct: 39 PPNPSQGPPPGGPPGAPPSQNP 60
Score = 25.4 bits (53), Expect = 0.79
Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Frame = +2
Query: 911 PRPXXPPPPXXXPPP--PPPXPP 973
P+ PP P PPP PP PP
Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAPP 56
Score = 23.0 bits (47), Expect = 4.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 908 PPRPXXPPPPXXXPPPPPPXPP 973
P P PP PPP PP
Sbjct: 31 PQAPQRGSPPNPSQGPPPGGPP 52
Score = 22.6 bits (46), Expect = 5.6
Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Frame = +1
Query: 700 QPXPXXSP-XPHHPWXPXPPIXXPPAXXXXPPP 795
QP P SP P P P PP PP
Sbjct: 24 QPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 21.8 bits (44), Expect = 9.7
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 908 PPRPXXPPPPXXXPPPPPPXPP 973
P R P P PP PP P
Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAP 55
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.8 bits (49), Expect = 2.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 957 GGGGXXXGGGGXXGRGG 907
GGGG G GG G GG
Sbjct: 1705 GGGGSLAGLGGLGGLGG 1721
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.8 bits (49), Expect = 2.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 957 GGGGXXXGGGGXXGRGG 907
GGGG G GG G GG
Sbjct: 1701 GGGGSLAGLGGLGGLGG 1717
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 23.4 bits (48), Expect = 3.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 979 GXGGGRGGGXGXXXXRGG 926
G G GRG G G RGG
Sbjct: 79 GRGKGRGHGKGGSRGRGG 96
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 947 PPPPPPXP 970
PPPPPP P
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 950 PPPPPXPP 973
PPPPP PP
Sbjct: 1355 PPPPPPPP 1362
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPP 144
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPP 144
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPP 144
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPP 144
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPP 144
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPP 144
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPP 144
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPP 393
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPP 393
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPP 393
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPP 393
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPP 393
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPP 393
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 372 PLTPFPPRFIPPDMYRLRPPP 392
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 357 PLTPFPPRFIPPDMYRLRPPP 377
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 736 PWXPXPPIXXPPAXXXXPPPP 798
P P PP PP PPP
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPP 393
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,155
Number of Sequences: 438
Number of extensions: 6792
Number of successful extensions: 40
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32411652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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