BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_F10
(885 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-475|AAF45833.2| 887|Drosophila melanogaster CG3588-PB,... 25 7.3
AL031366-1|CAA20520.1| 809|Drosophila melanogaster EG:100G7.6 p... 25 7.4
AY118781-1|AAM50641.1| 117|Drosophila melanogaster GH13168p pro... 29 8.5
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 29 8.5
AE014297-3096|AAF55954.1| 117|Drosophila melanogaster CG5778-PA... 29 8.5
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 29 8.5
>AE014298-475|AAF45833.2| 887|Drosophila melanogaster CG3588-PB,
isoform B protein.
Length = 887
Score = 25.4 bits (53), Expect(2) = 7.3
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 521 YLIQPXXXXXPPXPPPXP 574
Y++ P PP PPP P
Sbjct: 775 YVVDPSYPPPPPPPPPPP 792
Score = 22.2 bits (45), Expect(2) = 7.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 551 PPXPPPXPXXY 583
PP PPP P Y
Sbjct: 816 PPPPPPVPYPY 826
>AL031366-1|CAA20520.1| 809|Drosophila melanogaster EG:100G7.6
protein.
Length = 809
Score = 25.4 bits (53), Expect(2) = 7.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 521 YLIQPXXXXXPPXPPPXP 574
Y++ P PP PPP P
Sbjct: 635 YVVDPSYPPPPPPPPPPP 652
Score = 22.2 bits (45), Expect(2) = 7.4
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 551 PPXPPPXPXXY 583
PP PPP P Y
Sbjct: 676 PPPPPPVPYPY 686
>AY118781-1|AAM50641.1| 117|Drosophila melanogaster GH13168p
protein.
Length = 117
Score = 29.1 bits (62), Expect = 8.5
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 669 GGGGXXXXRXFXXGGEPXDPPXKGXXRPRXXXGXGGGXGGXXXXXG 532
GGGG GG P G P G GGG GG G
Sbjct: 58 GGGGGGYYNGGGGGGGGRRPVYSGNFGPGYGNGGGGGGGGYGGGGG 103
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 550 PXXPXXXPPPXPRPGXSLXXGVXXLPPXXKXPXXXXXPPP 669
P P PPP PRP + G PP K PP
Sbjct: 203 PSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPP 242
>AE014297-3096|AAF55954.1| 117|Drosophila melanogaster CG5778-PA
protein.
Length = 117
Score = 29.1 bits (62), Expect = 8.5
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 669 GGGGXXXXRXFXXGGEPXDPPXKGXXRPRXXXGXGGGXGGXXXXXG 532
GGGG GG P G P G GGG GG G
Sbjct: 58 GGGGGGYYNGGGGGGGGRRPVYSGNFGPGYGNGGGGGGGGYGGGGG 103
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 550 PXXPXXXPPPXPRPGXSLXXGVXXLPPXXKXPXXXXXPPP 669
P P PPP PRP + G PP K PP
Sbjct: 203 PSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPP 242
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,445,367
Number of Sequences: 53049
Number of extensions: 510638
Number of successful extensions: 1481
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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