Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_F05
         (863 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00043-6|AAC77507.1|  487|Caenorhabditis elegans Hypothetical pr...    31   1.4  
U13019-10|AAC24442.1|  757|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ...    28   9.9  
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut...    28   9.9  
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical...    28   9.9  

>U00043-6|AAC77507.1|  487|Caenorhabditis elegans Hypothetical
           protein T26A5.4 protein.
          Length = 487

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = -3

Query: 144 ENNNEQEKYDSREIHFDFSTKAGFEYRVRNNKYQXLR 34
           + N +++K+DS E+ +  S  +G ++RV +N +  LR
Sbjct: 421 KKNTQEQKFDSWEVMWKRSATSGADFRVPDNGFAKLR 457


>U13019-10|AAC24442.1|  757|Caenorhabditis elegans Hypothetical
           protein T12A2.2 protein.
          Length = 757

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query: 350 GTVFP-LLIKSRELHWMKFVLRYKLHIEWVC 439
           GTV+P L++ S  +HW+   L + +HI  VC
Sbjct: 88  GTVYPGLMVTSGLIHWILDSLNFHVHIREVC 118


>Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical
           protein F08A10.1c protein.
          Length = 672

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -3

Query: 324 GHVSLRAVMGTGVLGLAGRDGGSCAYRRHRRTRADD 217
           GH+ L A  GT V   +G  GGSCA       R +D
Sbjct: 88  GHIQLTA-NGTPVFAYSGGGGGSCAVSPSSSARRED 122


>Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical
           protein F08A10.1b protein.
          Length = 655

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -3

Query: 324 GHVSLRAVMGTGVLGLAGRDGGSCAYRRHRRTRADD 217
           GH+ L A  GT V   +G  GGSCA       R +D
Sbjct: 88  GHIQLTA-NGTPVFAYSGGGGGSCAVSPSSSARRED 122


>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
           protein.
          Length = 1497

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 292 GPHHSSQTDVTSLNLAQLVRNSISPVNKIKRT 387
           GP H S+ DV + ++ +   N + P N+++RT
Sbjct: 405 GPMHFSRLDVVASSIMRGRDNGVPPYNELRRT 436


>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered
           cuticle protein 3 protein.
          Length = 1497

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 292 GPHHSSQTDVTSLNLAQLVRNSISPVNKIKRT 387
           GP H S+ DV + ++ +   N + P N+++RT
Sbjct: 405 GPMHFSRLDVVASSIMRGRDNGVPPYNELRRT 436


>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
           protein F53G12.3 protein.
          Length = 1503

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 292 GPHHSSQTDVTSLNLAQLVRNSISPVNKIKRT 387
           GP H S+ DV + ++ +   N + P N+++RT
Sbjct: 415 GPMHFSRLDVVASSIMRGRDNGVPPYNELRRT 446


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,162,840
Number of Sequences: 27780
Number of extensions: 248648
Number of successful extensions: 733
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)