Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_F02
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1370 - 32990002-32990244,32990950-32991943,32992019-329922...    96   4e-20

>04_04_1370 -
           32990002-32990244,32990950-32991943,32992019-32992240,
           32993413-32993543
          Length = 529

 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 44/95 (46%), Positives = 59/95 (62%)
 Frame = +1

Query: 427 NKAQGXPLYNAIVWLDMRTSSTIDKLLDTVPNKTRNKNYLKPLCGLPLSPYFXAVKLRWL 606
           +K+ G PLYNAIVW+D RTS    +L   +      + +    CGL +S YF A+K+ WL
Sbjct: 95  SKSTGLPLYNAIVWMDARTSPICRRLESDLSG---GRTHFVETCGLAISTYFSALKVLWL 151

Query: 607 XDHVDPVKXAMXKGTCRFGTVDCWIIWNLTGGPNG 711
            ++VD VK A+  G   FGT+D W+IWNLTGG  G
Sbjct: 152 IENVDAVKNAVRAGDALFGTIDTWLIWNLTGGIGG 186



 Score = 61.7 bits (143), Expect = 7e-10
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
 Frame = +3

Query: 162 VGAXXAGXSXARFXXFKANSSDVVAXXQ*XLXXXFPQXGWVXXXPYAILAVVKTCIEKAV 341
           V +   G +  RF  +  ++  V A  Q      +P+ GWV   P  I+  VK C+ KA+
Sbjct: 7   VASIDQGTTSTRFIVYDRHAKPV-ASHQLEFKQHYPEAGWVEHDPMEIMESVKICMAKAL 65

Query: 342 EXLVALGGXPE-DIIAVGVTNQRETTIVWEQGTG 440
           +   A G   +  + A+G+TNQRETT++W + TG
Sbjct: 66  DKAAADGHNMDVGLKAIGITNQRETTVMWSKSTG 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,249,110
Number of Sequences: 37544
Number of extensions: 231275
Number of successful extensions: 387
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)