Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_F02
         (857 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U38378-4|AAA79749.1|  502|Caenorhabditis elegans Hypothetical pr...    99   2e-21
U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    29   5.6  

>U38378-4|AAA79749.1|  502|Caenorhabditis elegans Hypothetical
           protein R11F4.1 protein.
          Length = 502

 Score =   99 bits (238), Expect = 2e-21
 Identities = 51/106 (48%), Positives = 65/106 (61%)
 Frame = +1

Query: 427 NKAQGXPLYNAIVWLDMRTSSTIDKLLDTVPNKTRNKNYLKPLCGLPLSPYFXAVKLRWL 606
           +K  G PLYNAIVWLD RTSS  D+ +    +K++++   K   GLP+ PYF A+KL+WL
Sbjct: 92  DKETGKPLYNAIVWLDTRTSSLADEAISRTASKSKDEFRAKT--GLPIHPYFSALKLKWL 149

Query: 607 XDHVDPVKXAMXKGTCRFGTVDCWIIWNLTGGPNGGXXVXDVTNXS 744
             +V  VK A   G   FGTVD W+IW LTG       V DV+N S
Sbjct: 150 FQNVPEVKKAYADGNLMFGTVDTWLIWKLTGA-----YVTDVSNAS 190



 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 38/94 (40%), Positives = 55/94 (58%)
 Frame = +3

Query: 159 LVGAXXAGXSXARFXXFKANSSDVVAXXQ*XLXXXFPQXGWVXXXPYAILAVVKTCIEKA 338
           L+ A   G S +RF  F+A++ ++V   Q  +   FP  GWV   P  +   V +CI K 
Sbjct: 3   LLAAIDQGTSSSRFLVFEADTGELVTSHQIEVRQLFPHGGWVEMDPMELYDTVVSCISKT 62

Query: 339 VEXLVALGGXPEDIIAVGVTNQRETTIVWEQGTG 440
           +E L  LG   ++I +VGV NQRET+IVW++ TG
Sbjct: 63  IEKLENLGISADEIKSVGVANQRETSIVWDKETG 96


>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 413 CFSLVCDSNCYYILWXXPQCHQXLHCFFYARF 318
           CF   C++N Y+ L    + H  L+C F   F
Sbjct: 603 CFCQNCNNNTYWCLRTKNETHNFLYCEFVTEF 634


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,832,367
Number of Sequences: 27780
Number of extensions: 198346
Number of successful extensions: 331
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)