Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_F01
         (852 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094861-1|AAM11214.1|  362|Drosophila melanogaster RE22192p pro...    31   2.7  
AE014297-3653|AAF56353.1|  362|Drosophila melanogaster CG7016-PA...    31   2.7  

>AY094861-1|AAM11214.1|  362|Drosophila melanogaster RE22192p
           protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -1

Query: 819 GGGGAPXPXXFFXXGAPPPPXXG 751
           GGG  P P   F  G PPPP  G
Sbjct: 160 GGGRGPPPRPGFNGGGPPPPRPG 182



 Score = 29.1 bits (62), Expect = 8.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 816 GGGAPXPXXFFXXGAPPPPXXG 751
           GGG P P   +  G PPPP  G
Sbjct: 173 GGGPPPPRPGWNGGGPPPPMPG 194



 Score = 29.1 bits (62), Expect = 8.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 816 GGGAPXPXXFFXXGAPPPPXXG 751
           GGG P P   +  G PPPP  G
Sbjct: 185 GGGPPPPMPGWNGGGPPPPRPG 206



 Score = 29.1 bits (62), Expect = 8.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 816 GGGAPXPXXFFXXGAPPPPXXG 751
           GGG P P   +  G PPPP  G
Sbjct: 197 GGGPPPPRPGWNGGGPPPPRPG 218


>AE014297-3653|AAF56353.1|  362|Drosophila melanogaster CG7016-PA
           protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -1

Query: 819 GGGGAPXPXXFFXXGAPPPPXXG 751
           GGG  P P   F  G PPPP  G
Sbjct: 160 GGGRGPPPRPGFNGGGPPPPRPG 182



 Score = 29.1 bits (62), Expect = 8.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 816 GGGAPXPXXFFXXGAPPPPXXG 751
           GGG P P   +  G PPPP  G
Sbjct: 173 GGGPPPPRPGWNGGGPPPPMPG 194



 Score = 29.1 bits (62), Expect = 8.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 816 GGGAPXPXXFFXXGAPPPPXXG 751
           GGG P P   +  G PPPP  G
Sbjct: 185 GGGPPPPMPGWNGGGPPPPRPG 206



 Score = 29.1 bits (62), Expect = 8.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 816 GGGAPXPXXFFXXGAPPPPXXG 751
           GGG P P   +  G PPPP  G
Sbjct: 197 GGGPPPPRPGWNGGGPPPPRPG 218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,733,539
Number of Sequences: 53049
Number of extensions: 550529
Number of successful extensions: 2155
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1894
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)