Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_E24
(932 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 36 0.006
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.006
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.019
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.13
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.13
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.54
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.94
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.2
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 2.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 2.9
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 24 2.9
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 5.7
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 6.6
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 499 PPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPPXP 624
PP P P PP P+ A P P+ P P G PP P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 499 PPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXP-PPXGXPPXP 624
PP P P PP P+ A P+P+ G P P G PP P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 499 PPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPPXP 624
PP PPP PP P+ P P+ P G PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 33.9 bits (74), Expect = 0.033
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 499 PPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPPXP 624
P P P PP P P P G PPP PP P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 32.7 bits (71), Expect = 0.076
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +1
Query: 499 PPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPPXP 624
PP P P PP P+ A P+P+ P PP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 499 PPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPPXP 624
PP P P PP P+ A P P+ P PP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/53 (28%), Positives = 18/53 (33%)
Frame = +1
Query: 466 PPXXRGXXXWXPPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPPXP 624
PP + P P P PP P+ P P+ P G PP P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +1
Query: 466 PPXXRGXXXWXPPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPPXP 624
PP + P P P PP P A P P+ P P G PP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAP-PVPKPSVAAPPVPVPSGAPPVP 1143
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +1
Query: 499 PPPPPPPXXPPXPRFXX----AXRXTPSPTXGXXXXPPPXGXPPXP 624
PP P P PP P+ A P+P+ P P G PP P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 30.7 bits (66), Expect = 0.31
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 499 PPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPP 618
PP PPP PP P P PT P P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +1
Query: 499 PPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPPXP 624
PP P P P P P+ P P G PP P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 816 PPNPXPRPXXPPPPHXRPPQXXXXPPXSXXPXPXXPPP 929
PP P P PP P PP P P PPP
Sbjct: 1179 PPVPKPAAGVPPVP---PPSEAPPVPKPSVGVPPVPPP 1213
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/54 (25%), Positives = 16/54 (29%)
Frame = +1
Query: 463 PPPXXRGXXXWXPPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPPXP 624
PP P P PP P+ P P+ P P PP P
Sbjct: 991 PPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVP 1044
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +3
Query: 816 PPNPXPRPXXPP--PPHXRPPQXXXXPPXSXXPXPXXPPPP 932
PP P P PP PP PP P P PP
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPP-HXRPPQXXXXPPXSXXPXPXXPPPP 932
PP + P PPPP H P + PP P PPPP
Sbjct: 210 PPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPP-HXRPPQXXXXPPXSXXPXPXXPPPP 932
PP + P PPPP H P + PP P PPPP
Sbjct: 223 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPP-HXRPPQXXXXPPXSXXPXPXXPPPP 932
PP + P PPPP H P + PP P PPPP
Sbjct: 236 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPP-HXRPPQXXXXPPXSXXPXPXXPPPP 932
PP + P PPPP H P + PP P PPPP
Sbjct: 249 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPP-HXRPPQXXXXPPXSXXPXPXXPPPP 932
PP + P PPPP H P + PP P PPPP
Sbjct: 262 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPP-HXRPPQXXXXPPXSXXPXPXXPPPP 932
PP + P PPPP H P + PP P PPPP
Sbjct: 275 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPP-HXRPPQXXXXPPXSXXPXPXXPPPP 932
PP + P PPPP H P + PP P PPPP
Sbjct: 288 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPP-HXRPPQXXXXPPXSXXPXPXXPPPP 932
PP + P PPPP H P + PP P PPPP
Sbjct: 301 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 34.7 bits (76), Expect = 0.019
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 816 PPNPXPRPXXPPPP-HXRPPQXXXXPPXSXXPXPXXPPPP 932
P + P PPPP H +P + PP P PPPP
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPPHXRPPQXXXXPPXSXXPXPXXPPPP 932
P P P P P PP P P PP P PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 34.7 bits (76), Expect = 0.019
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 463 PPPXXRGXXXWXPPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPP 618
PPP P P P P PP P P P PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.41
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPPHXRPPQXXXXPPXSXXPXPXXPPPP 932
PPP P PPPP PP P P P P
Sbjct: 764 PPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 29.1 bits (62), Expect = 0.94
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +1
Query: 463 PPPXXRGXXXWXPPPPPPPXXPPXPRFXXAXRXTPSP 573
PPP G PPPPPP PP + P+P
Sbjct: 763 PPPPPPGVAGAGPPPPPP--PPPAVSAGGSRYYAPAP 797
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 816 PPNPXPRPXXPPPPHXRPPQXXXXPPXSXXPXPXXPPPP 932
PP P P P P P PP P PPPP
Sbjct: 732 PPPPPPAVIVPTP---APAPIPVPPPAPIMGGPPPPPPP 767
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.019
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 813 PPPNPXPRPXXPPP-PHXRPPQXXXXPP-XSXXPXPXXPPPP 932
PP + PRP PPP P PP PP S P P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 31.5 bits (68), Expect = 0.18
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPPHXRPPQXXXXPPXSXXPXPXXPPPP 932
P P+ P P P P PP P P PPPP
Sbjct: 166 PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 29.9 bits (64), Expect = 0.54
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 837 PXXPPPPHXRPPQXXXXPPXSXXPXPXXPPP 929
P P PP PQ PP S P P PPP
Sbjct: 125 PSAPAPP---TPQSELRPPTSAPPRPSIPPP 152
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 816 PPNPXPRPXXPPP-PHXRPPQXXXXPPXSXXPXPXXPPP 929
P P P P PP P PP PP + P PP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Frame = +3
Query: 816 PPNPX----PRPXXPPPPHXRPPQXXXXP--PXSXXPXPXXPPPP 932
PP P P PP P PP P P P P PPP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 22.6 bits (46), Expect(2) = 4.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 499 PPPPPPPXXP 528
P PPPPP P
Sbjct: 3 PAPPPPPPAP 12
Score = 22.6 bits (46), Expect(2) = 4.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 502 PPPPPPXXPP 531
PPPPPP P
Sbjct: 5 PPPPPPAPAP 14
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPPHXRPPQXXXXPPXSXXPXPXXPPPP 932
PP P P PPPP PP PP P P PPPP
Sbjct: 1699 PPQMSAPTP--PPPPMSVPP-PPSAPPMPAGP-PSAPPPP 1734
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 819 PNPXPRPXXPPPPHXRPPQXXXXPPXSXXPXPXXPPP 929
P P P P PPP PP P P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 29.9 bits (64), Expect = 0.54
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPPHXRPPQXXXXPPXSXXPXPXXPPPP 932
P P RP PP P PP S P P PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAP-TPPPPPMSVPPPPSAPPMP 1724
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = +1
Query: 499 PPP---PPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPP 603
PPP PPPP PP P + P P P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 502 PPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPP 603
PPPPP PP P P P PPP
Sbjct: 1707 PPPPPMSVPPPP------SAPPMPAGPPSAPPPP 1734
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -2
Query: 928 GGGXXGXGXXEXGGXXXXWGGRXWGGGGXXGRGXGXGG 815
GG G G GG GGR GG GRG GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 29.1 bits (62), Expect = 0.94
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 928 GGGXXGXGXXEXGGXXXXWGGRXWGGGGXXGRGXGXGG 815
GGG G GG GGR GG G G GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 928 GGGXXGXGXXEXGGXXXXWGGRXWGGGGXXGRGXGXGG 815
GG G G G GGR GG GRG GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -2
Query: 931 GGGGXXGXGXX-EXGGXXXXWGGRXWGGGGXXGRGXGXGG 815
G GG G G GG G R GG GRG GG
Sbjct: 31 GRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 925 GGXXGXGXXEXGGXXXXWGGRXWGGGGXXGRGXGXGG 815
GG G G G GG G GG G G GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 922 GXXGXGXXEXGGXXXXWGGRXWGGGGXXG-RGXGXGG 815
G G GG GGR GGG G RG G GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGG 42
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -2
Query: 931 GGGGXXGXGXXEXGGXXXXWGGRXWG-GGGXXGRGXGXGG 815
G GG G GG GGR GGG G G GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.54
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 813 PPPNPXPRPXXPPPPHXRPPQXXXXPP 893
PP NP P PPPP PP PP
Sbjct: 5 PPGNPPP---PPPPPGFEPPSQPPPPP 28
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 502 PPPPPPXXPPXPRFXXAXRXTPSPTXG 582
PP PP PP P F + P P G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 837 PXXPPPPHXRPPQXXXXPPXSXXPXPXXPPPP 932
P PPPP PP PP P PPPP
Sbjct: 6 PGNPPPP---PPPPGFEPPSQ----PPPPPPP 30
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 463 PPPXXRGXXXWXPPPPPPP 519
PPP G PPPPPP
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 463 PPPXXRGXXXWXPPPPPPP 519
PPP PPPPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.94
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +1
Query: 466 PPXXRGXXXWXPPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPP 603
PP G PPPPPP PR A P P G PPP
Sbjct: 325 PPIGNGSSNSSLPPPPPP-----PR-SNAAGSIPLPPQGRSAPPPP 364
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = +1
Query: 466 PPXXRGXXXWXPPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPP-PXGXPPXP 624
PP PP P PP PP PS G PP P P P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 463 PPPXXRGXXXWXPPPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPPXP 624
PP G P PP P PP P A P P P P P P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPA--APPLPPAAPAPPPAPAPAPAAP 487
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 816 PPNPXPRPXXPPPPHXRPPQXXXXPPXSXXPXPXXPPPP 932
PP P P PP P P PP + P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGM-PAAPPLPPAAPAPPPAPAPAP 484
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 816 PPNPXPRPXXPPPPHXRPPQXXXXPPXSXXPXPXXPPPP 932
PP P PPPP P PP S PP P
Sbjct: 354 PPQGRSAPP-PPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 837 PXXPPPPHXRPPQXXXXPPXSXXPXPXXPPPP 932
P PPPP PP P PPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPP--PPPP 366
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Frame = +1
Query: 463 PPPXXRGXXXWXPPPPP-----PPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPP 618
PPP R P PP PP PP PR + P P P PP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPP--PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 816 PPNPXPRPXXPPPPHXRPPQXXXXPPXSXXPXPXXPP 926
PP P P P P PP P P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Frame = +3
Query: 816 PPNPXPRPXXPPPPHXRPPQXXXXP---PXSXXPXPXXPPPP 932
P P PPP +PP P P P PPPP
Sbjct: 156 PTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 28.7 bits (61), Expect = 1.2
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 499 PPPPPPPXXPP 531
PPPPPPP PP
Sbjct: 238 PPPPPPPTLPP 248
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +1
Query: 499 PPPPPPPXXPPXPRFXXAXRXT-PSPTXGXXXXPPPXGXPP 618
PPPP P PP P + R T S + PP P
Sbjct: 273 PPPPATPSQPPRPPTNASTRSTGTSSSMAHSYDSPPSPSSP 313
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/41 (29%), Positives = 13/41 (31%)
Frame = +1
Query: 502 PPPPPPXXPPXPRFXXAXRXTPSPTXGXXXXPPPXGXPPXP 624
P PPPP P P P P+ PP P
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPP 276
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -2
Query: 931 GGGGXXGXGXXEXGGXXXXWGGRXWG-GGGXXGRG 830
GG G G G GG +GG G GGG G G
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 931 GGGGXXGXGXXEXGGXXXXWGGRXWGGGGXXGRGXGXGG 815
G GG G G GG GG GGG G G GG
Sbjct: 203 GPGGFGGFGGF--GGEGHHHGGHGGFGGGPGGFEGGPGG 239
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -2
Query: 928 GGGXXGXGXXEXGGXXXXWGGRXWGGGGXXGRGXGXGGG 812
GGG G G G G +GG G G G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGG 225
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 928 GGGXXGXGXXEXGGXXXXWGGRXWGGGGXXGRGXGXGGG 812
G G G GG +GG GG G RG G GGG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRG-GFGGG 173
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -2
Query: 928 GGGXXGXGXXEXGGXXXXWGGRXWGGGGXXGRGXGXGG 815
GG G G GG +GG GG G RG GG
Sbjct: 148 GGSRGGFGGNSRGG----FGGGSRGGFGGGSRGGSRGG 181
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 24.2 bits (50), Expect(2) = 2.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 493 WXPPPPPPP 519
+ PPPPPPP
Sbjct: 368 YSPPPPPPP 376
Score = 21.4 bits (43), Expect(2) = 2.9
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +1
Query: 499 PPPPPPPXXPPXPR 540
PPPPPP P+
Sbjct: 372 PPPPPPELLNHSPK 385
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 22.6 bits (46), Expect(2) = 5.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 499 PPPPPPPXXP 528
P PPPPP P
Sbjct: 905 PTPPPPPPLP 914
Score = 21.8 bits (44), Expect(2) = 5.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 505 PPPPPXXPPXPRFXXAXRXTPSP 573
PPPPP PP P A SP
Sbjct: 945 PPPPP--PPPPLVSAAGGKFVSP 965
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -2
Query: 928 GGGXXGXGXXEXGGXXXXWGGRXWGGGGXXGRGXGXGG 815
GGG G G GG G +GGG GRG G
Sbjct: 446 GGGSRG-GRGGFGGRGGFGGRGGFGGGRGRGRGGARSG 482
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,224,913
Number of Sequences: 5004
Number of extensions: 18649
Number of successful extensions: 383
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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