Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_E17
         (908 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   5.1  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   6.7  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   6.7  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   6.7  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/40 (27%), Positives = 12/40 (30%)
 Frame = +2

Query: 692 PHRXXXXPXPXPPXXPPPXRXPRXPXPPASPAXPXPPXXP 811
           P      P P P   P   +    P P   P    PP  P
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +3

Query: 603 GPXSXPFXPTPPPPXXSXPXP 665
           G    P  P PPPP  S   P
Sbjct: 333 GDSDTPPKPAPPPPPPSSSGP 353


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/29 (34%), Positives = 10/29 (34%)
 Frame = +2

Query: 797 PPXXPLRKXXPPPPXXTPGXXXPXAQPSP 883
           PP  P R      P   PG   P   P P
Sbjct: 24  PPTRPTRLRREAKPEAEPGNNRPVYIPQP 52


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/29 (34%), Positives = 10/29 (34%)
 Frame = +2

Query: 797 PPXXPLRKXXPPPPXXTPGXXXPXAQPSP 883
           PP  P R      P   PG   P   P P
Sbjct: 25  PPTRPTRLRREAEPEAEPGNNRPVYIPQP 53


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/29 (34%), Positives = 10/29 (34%)
 Frame = +2

Query: 797 PPXXPLRKXXPPPPXXTPGXXXPXAQPSP 883
           PP  P R      P   PG   P   P P
Sbjct: 25  PPTRPARLRREAKPEAEPGNNRPIYIPQP 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,103
Number of Sequences: 438
Number of extensions: 7174
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)