Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_E16
(872 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 42 1e-04
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 40 5e-04
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 40 5e-04
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 40 6e-04
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 39 8e-04
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 39 0.001
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 38 0.001
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 38 0.002
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 37 0.003
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 37 0.003
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 31 0.16
SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr ... 31 0.21
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 29 0.65
SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||M... 28 1.5
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 26 8.1
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +2
Query: 674 FIIGWILVIVAKSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGAL 826
F+IG +++ ++++ M+ V R G G G+ + PMY E+A +RG L
Sbjct: 160 FVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYITELAPARLRGRL 210
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 39.9 bits (89), Expect = 5e-04
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 674 FIIGWILVIVA-KSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGALSTLITXXX 850
++IG I+ + A S + VA+I++GLG G + +AP Y E+A +RG +
Sbjct: 96 YLIGVIIQVTAVPSWVQIMVAKIWTGLGIGALSVLAPGYQSEVAPPHIRGTIVVTYQLCV 155
Query: 851 KVGI 862
GI
Sbjct: 156 TAGI 159
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 39.9 bits (89), Expect = 5e-04
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +2
Query: 674 FIIGWILVIVA-KSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGAL 826
+IIG IL++ A S + V ++F+GL G + ++P Y E+A ++RGA+
Sbjct: 96 YIIGQILLVTAVPSWVQIMVGKLFTGLTIGALSVLSPGYQSEVAPPQIRGAV 147
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 39.5 bits (88), Expect = 6e-04
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 665 AIPFIIGWILVIVAKSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGAL 826
+I I+G I+ + A L + V R G G G+ + P+Y EIA +++RG L
Sbjct: 164 SIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYLSEIAPSKIRGRL 217
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 39.1 bits (87), Expect = 8e-04
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 653 CF*GAIPFIIGWILVIVAKSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGAL 826
CF + I +LV S + V +I +G+G G + ++P Y E+A ++RGA+
Sbjct: 90 CFFSGVYIIAELLLVTAVPSWIQVLVGKILAGVGIGALSVLSPGYQSEVAPPQIRGAV 147
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 38.7 bits (86), Expect = 0.001
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Frame = +2
Query: 677 IIGWILVIVA------KSLP---MLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGALS 829
I+GW LV + ++P + VA+I++GLG G + +AP Y E + +RGA+
Sbjct: 89 IMGWTLVYITGVIVQLTTIPSWVQMMVAKIWTGLGIGALSVIAPGYQSESSPPHIRGAIV 148
Query: 830 TLITXXXKVGI 862
T +GI
Sbjct: 149 TTYQLFITLGI 159
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 668 IPFIIGWILVIVA-KSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGALST 832
I ++IG IL + A S + VA+I++GL G + +AP + E+A ++RG + T
Sbjct: 94 IVYLIGIILQVTAVPSWVQIMVAKIWTGLSIGALSVLAPGFQSEVAPADLRGTIVT 149
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 674 FIIGWIL-VIVAKSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGALSTLITXXX 850
++IG I+ V S + VA+I++GL G + + P Y E+A +RGA+ T
Sbjct: 64 YLIGIIIQVTTVPSWVQILVAKIWTGLSIGALSVITPGYQSEVAPAIMRGAIVTTYQLFI 123
Query: 851 KVGI 862
+GI
Sbjct: 124 TLGI 127
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 674 FIIGWILVIVA-KSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGAL 826
+IIG I+ + A S + VA+I++G+G G + +AP Y E A +RG +
Sbjct: 100 YIIGIIVQVTAVPSWVQIMVAKIWTGIGIGALSVLAPGYQSETAPPSIRGTV 151
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 668 IPFIIGWILVIVA-KSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGALST 832
I ++IG IL + A S + VA+I++GL G + +AP + E+A +RG + T
Sbjct: 94 IVYLIGIILQVTAVPSWVQIMVAKIWTGLAIGALSVLAPGFQSEVAPATLRGTIVT 149
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 31.5 bits (68), Expect = 0.16
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +2
Query: 674 FIIGWILVIVAKSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGALSTLITXXXK 853
F +G +++SLP L +AR +G+G G + T++ + + +I + RG +
Sbjct: 106 FTLGTFWCGISRSLPELCMARALAGIGGGGLGTMSSIISSDIVSLRERGTWQGITNIVWG 165
Query: 854 VG 859
+G
Sbjct: 166 IG 167
>SPCC18.02 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 448
Score = 31.1 bits (67), Expect = 0.21
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Frame = +2
Query: 668 IPFIIGWI-------LVIVAKSLPMLYVARIFSGLGYGVVYTV 775
+P +IG I L+ S+PML VAR+ GL VV+TV
Sbjct: 87 VPMLIGLIFLTSATALLTFGNSVPMLIVARVLQGLSAAVVWTV 129
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 29.5 bits (63), Expect = 0.65
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = +2
Query: 635 SEEKLHCF*GAIPFIIGWILVIVAKSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEV 814
S KL G F I I V VAK + + + R FSG TV ++ +N+
Sbjct: 197 SGRKLPLLIGMFGFGIFNISVAVAKDIQTIMMCRFFSGFFASAPLTVVAAAFADMYSNKH 256
Query: 815 RGALSTL 835
RG T+
Sbjct: 257 RGTAITI 263
>SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 155
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 819 PRTSFVAISPVYIGATVYTTP--*PRPEKIRATYSIGKDFATMTSIQPIMKGIAP 661
PR S + Y+ ATVYT+P PR +R T+ + T T + + + + P
Sbjct: 58 PRRSPTSPQSAYVPATVYTSPIGSPRRGSVRYTHVMAHPNTTTTVSENLPEEVPP 112
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 8.1
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 662 GAIPFIIGWILVIVAKSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRG 820
G F I I V VAK + + + R FSG +V ++ N+ RG
Sbjct: 169 GMFMFSIFSIAVAVAKDVQTVMICRFFSGFCASSPLSVVAAAFADMFDNKTRG 221
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,082,916
Number of Sequences: 5004
Number of extensions: 59553
Number of successful extensions: 174
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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