Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_E16
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-3|CAA16405.1|  613|Caenorhabditis elegans Hypothetical ...    42   6e-04
Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical pr...    40   0.003
AL021497-2|CAA16400.1|  606|Caenorhabditis elegans Hypothetical ...    38   0.012
AF040646-6|AAK31540.1|  510|Caenorhabditis elegans Hypothetical ...    36   0.038
AF040646-5|AAK31539.1|  492|Caenorhabditis elegans Hypothetical ...    36   0.038
AF039046-2|AAB94218.2|  516|Caenorhabditis elegans Hypothetical ...    29   4.3  

>AL021497-3|CAA16405.1|  613|Caenorhabditis elegans Hypothetical
           protein Y51A2D.5 protein.
          Length = 613

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 19/51 (37%), Positives = 29/51 (56%)
 Frame = +2

Query: 674 FIIGWILVIVAKSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGAL 826
           F+ G ++  VA +  ++ + RIF G+G G    V P+Y GE +   VRG L
Sbjct: 106 FVCGAVICAVAWTKIVMLIGRIFLGVGIGFASMVVPVYLGEASPTHVRGTL 156


>Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical
           protein M01F1.5 protein.
          Length = 604

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 20/67 (29%), Positives = 33/67 (49%)
 Frame = +2

Query: 665 AIPFIIGWILVIVAKSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGALSTLITX 844
           ++ F IG I+   A +  +L + RI  GL  G    + P+Y  E + + +RG L T    
Sbjct: 105 SVTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPIYVSEASPSHIRGKLVTGFQL 164

Query: 845 XXKVGIL 865
              VG++
Sbjct: 165 MITVGLV 171


>AL021497-2|CAA16400.1|  606|Caenorhabditis elegans Hypothetical
           protein Y51A2D.4 protein.
          Length = 606

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +2

Query: 674 FIIGWILVIVAKSLPMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGAL 826
           F IG ++   + +  ML V R+  G+  G    + P+Y GE A   VRG L
Sbjct: 105 FTIGALVCAASVNKIMLLVGRVLLGIAIGFASMIVPVYLGETAPTHVRGML 155


>AF040646-6|AAK31540.1|  510|Caenorhabditis elegans Hypothetical
           protein H17B01.1b protein.
          Length = 510

 Score = 35.9 bits (79), Expect = 0.038
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = +2

Query: 692 LVIVAKSL---PMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGALSTLITXXXKVGI 862
           L+ +AKS+   PM+ + R+  GL  G    + PM+  EI+ N +RG L +L      + I
Sbjct: 143 LMGLAKSVGAYPMVILGRLIIGLNCGFSSALVPMFLTEISPNNLRGMLGSLHQLLVTIAI 202

Query: 863 L 865
           L
Sbjct: 203 L 203


>AF040646-5|AAK31539.1|  492|Caenorhabditis elegans Hypothetical
           protein H17B01.1a protein.
          Length = 492

 Score = 35.9 bits (79), Expect = 0.038
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = +2

Query: 692 LVIVAKSL---PMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGALSTLITXXXKVGI 862
           L+ +AKS+   PM+ + R+  GL  G    + PM+  EI+ N +RG L +L      + I
Sbjct: 125 LMGLAKSVGAYPMVILGRLIIGLNCGFSSALVPMFLTEISPNNLRGMLGSLHQLLVTIAI 184

Query: 863 L 865
           L
Sbjct: 185 L 185


>AF039046-2|AAB94218.2|  516|Caenorhabditis elegans Hypothetical
           protein R09B5.11 protein.
          Length = 516

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +1

Query: 613 SAYLADKFGRKTTLL 657
           S +LADKFGRK+TLL
Sbjct: 118 SGFLADKFGRKSTLL 132



 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +2

Query: 716 PMLYVARIFSGLGYGVVYTVAPMYTGEIATNEVRGALSTLITXXXKVGIL 865
           PM+   R   GL  G+   + PM+  E+A   +RG   +       V I+
Sbjct: 155 PMIVFGRFLVGLNCGITSGLVPMFLTELAPANLRGKCGSFHQLNISVAIV 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,742,782
Number of Sequences: 27780
Number of extensions: 321009
Number of successful extensions: 708
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)