Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_E14
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751...    30   2.1  
03_02_0161 + 6046949-6047063,6048759-6048844,6049029-6049094,604...    30   2.8  
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291...    29   6.4  
01_01_0933 - 7368672-7368785,7368860-7368895,7369581-7369715,736...    29   6.4  
01_06_1831 + 40198371-40198625,40199614-40200141                       28   8.4  
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    28   8.4  

>12_02_1035 -
           25570009-25571241,25571940-25573709,25573797-25575118,
           25575208-25575555,25576540-25576633
          Length = 1588

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/49 (32%), Positives = 29/49 (59%)
 Frame = +3

Query: 498 EKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAXYDDFAKXTQE 644
           EKLQ  + +  QE+Q+L KK+SS V E +++   ++ +  +  A+   E
Sbjct: 153 EKLQKEISSLSQENQELKKKISS-VLENSDRAESEVASLKEALAQQEAE 200


>03_02_0161 +
           6046949-6047063,6048759-6048844,6049029-6049094,
           6049408-6049860,6049960-6050115,6050319-6050465,
           6050570-6050641,6050730-6051293
          Length = 552

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 495 REKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAXYDDFAKXTQEVIKKIQEXAN 674
           R  LQ  +Q  +++   +A+K +    + N+KL  K+KA  DD    +       ++ A 
Sbjct: 337 RRLLQGEIQR-LRDKIAMAEKSAKAEAQLNDKLRRKLKALEDDMRNESSNTSASNKDNAT 395

Query: 675 AKQ 683
           +KQ
Sbjct: 396 SKQ 398


>07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,
            2916053-2916113,2916243-2916365,2916505-2916537,
            2916617-2916709,2916839-2916934,2917025-2917203,
            2917344-2917530,2918051-2918184,2918311-2918518,
            2918598-2918633,2918785-2919241,2919633-2919736,
            2920489-2920569,2920646-2920697,2920837-2920876,
            2920991-2921085,2921241-2921383,2921899-2922006,
            2922120-2922221,2922302-2922348,2922425-2922554,
            2923173-2923304,2923404-2923616,2923709-2923963,
            2924053-2924799
          Length = 1460

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -2

Query: 652  LITSWVXFAKSS*XALILGASFSLVSCTFEDTFFANFWDSCTVFCTA-ACSFSRRXV 485
            +ITS +  AK S    +      L +C+ E+T    FW    + CT   CS+ RR +
Sbjct: 1329 MITSKIPVAKRSLERFVFQVKALLHNCSTEET----FWMGTYILCTPNFCSWQRREI 1381


>01_01_0933 -
           7368672-7368785,7368860-7368895,7369581-7369715,
           7369825-7369989,7370060-7370140,7370316-7370391,
           7370479-7370612,7370706-7370798,7371860-7372188,
           7372290-7372350,7372407-7372778
          Length = 531

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -1

Query: 458 PCGAPRPCARCSASTVPKPPWPCRSRLRALPWRXLAKALSC 336
           PC  P P  R  ++T  + PW    R R + W  L     C
Sbjct: 26  PCTTPAPRMRSLSATTTRRPWRTGWRGRPMRWASLVVMKLC 66


>01_06_1831 + 40198371-40198625,40199614-40200141
          Length = 260

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = +2

Query: 560 VLERAGD**ETGAQDQGRLRRLREXHPGGDQEDPGGRQRQAVSVDI 697
           +L RAG   E GA+ Q R RRL E H  G  +  G    Q V VD+
Sbjct: 192 LLRRAG---EQGARPQERARRLEELH--GRPDVAGEEGCQQVQVDV 232


>01_06_0124 -
           26692731-26697046,26698749-26698827,26698899-26698955,
           26699321-26699416
          Length = 1515

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = +3

Query: 474 EKNATXLR-EKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKA 611
           EKNA  L+ ++L+A ++N   E ++   +VS+ +++ NE+L  KI +
Sbjct: 832 EKNAALLQVQQLEANLKNLESELEQKQSQVSA-LEQANEELREKISS 877


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,302,634
Number of Sequences: 37544
Number of extensions: 144225
Number of successful extensions: 666
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)