Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_E14
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29095-4|CAA82348.3|  444|Caenorhabditis elegans Hypothetical pr...    33   0.20 
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ...    31   0.81 
AF038606-4|AAB92026.1|  331|Caenorhabditis elegans Hypothetical ...    31   1.1  
AF038606-3|AAX55701.1|  393|Caenorhabditis elegans Hypothetical ...    31   1.1  
AF038606-2|AAX55700.1|  404|Caenorhabditis elegans Hypothetical ...    31   1.1  
AB182367-3|BAD23998.1|  331|Caenorhabditis elegans hypothetical ...    31   1.1  
AB182367-2|BAD23997.1|  393|Caenorhabditis elegans hypothetical ...    31   1.1  
AB182367-1|BAD23996.1|  404|Caenorhabditis elegans hypothetical ...    31   1.1  
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>Z29095-4|CAA82348.3|  444|Caenorhabditis elegans Hypothetical
           protein R10E11.5 protein.
          Length = 444

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 504 LQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAXYDDFAKXTQEVIKKIQE 665
           LQ A +  VQ   +  K + SNV E  + +   I    DD  K  ++  K ++E
Sbjct: 306 LQKAEEEVVQTIDQTVKNIKSNVNEVKKDVEKNIAEKVDDITKELEKSAKSLEE 359


>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
            potassium channelsprotein 2 protein.
          Length = 1564

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +3

Query: 477  KNATXLREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAXYDDFAKXTQEVIKK 656
            +N   + +K    VQ   +  QK+ KK + NVQ+  +K A   K    +  K  ++  K 
Sbjct: 1265 ENVQKMCKKCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKKCAKN 1324

Query: 657  IQE 665
            +Q+
Sbjct: 1325 VQK 1327


>AF038606-4|AAB92026.1|  331|Caenorhabditis elegans Hypothetical
           protein C04C3.5a protein.
          Length = 331

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 504 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAXYDDFAK 632
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+   K
Sbjct: 110 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 154


>AF038606-3|AAX55701.1|  393|Caenorhabditis elegans Hypothetical
           protein C04C3.5c protein.
          Length = 393

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 504 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAXYDDFAK 632
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+   K
Sbjct: 172 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 216


>AF038606-2|AAX55700.1|  404|Caenorhabditis elegans Hypothetical
           protein C04C3.5b protein.
          Length = 404

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 504 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAXYDDFAK 632
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+   K
Sbjct: 183 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 227


>AB182367-3|BAD23998.1|  331|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 331

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 504 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAXYDDFAK 632
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+   K
Sbjct: 110 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 154


>AB182367-2|BAD23997.1|  393|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 393

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 504 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAXYDDFAK 632
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+   K
Sbjct: 172 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 216


>AB182367-1|BAD23996.1|  404|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 404

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +3

Query: 504 LQAAVQNTVQESQKLAKK---VSSNVQETNEKLAPKIKAXYDDFAK 632
           LQA VQN  QE+++L+ K   V+S+  E +EK+  K K  Y+   K
Sbjct: 183 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 227


>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical protein
            B0464.2 protein.
          Length = 1150

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 531  QESQKLAKKVSSNVQETNEKLAPKIKAXYDDFAKXTQEVIKKIQEXANAKQ*ASI 695
            ++  K AKK S   +E  +   P      +   K  +E  +K+QE  +AKQ A I
Sbjct: 977  RKKDKAAKKASRKKRERRDSGGPDSNRRDEKKRKRKEERDRKLQEKLSAKQSAKI 1031


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,864,852
Number of Sequences: 27780
Number of extensions: 108092
Number of successful extensions: 493
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)