Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_E13
(875 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC057233-1|AAH57233.1| 162|Homo sapiens keratinocyte associated... 109 1e-23
BC048205-1|AAH48205.1| 146|Homo sapiens KRTCAP2 protein protein. 109 1e-23
BC029806-1|AAH29806.1| 162|Homo sapiens keratinocyte associated... 109 1e-23
AL607067-2|CAH71196.1| 162|Homo sapiens keratinocyte associated... 109 1e-23
AY157577-1|AAO13161.2| 114|Homo sapiens keratinocytes associate... 87 6e-17
BC004355-1|AAH04355.1| 218|Homo sapiens polymerase (RNA) III (D... 31 5.5
AK056984-1|BAB71332.1| 218|Homo sapiens protein ( Homo sapiens ... 31 5.5
>BC057233-1|AAH57233.1| 162|Homo sapiens keratinocyte associated
protein 2 protein.
Length = 162
Score = 109 bits (262), Expect = 1e-23
Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Frame = +1
Query: 115 GXXAVXRAXSFVLSSIFTLLLFSGMQMYQXXXXXXXXXXXXXXXXXXXMFMFFVTAVGNL 294
G V S LSS+ +LLLF+GMQMY +F+F +TA NL
Sbjct: 25 GMMVVGTVTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL 84
Query: 295 EXILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTCLIFCVITIYYMNKLSQKKYAV 471
E ++FGK FQ K+ PE++L + ++L A+G++HR+C TTC IF ++ +YY+NK+S Y
Sbjct: 85 ENLVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQA 144
Query: 472 VAP--QPAXVKSRRHK*N 519
AP PA V + K N
Sbjct: 145 AAPVLTPAKVTGKSKKRN 162
>BC048205-1|AAH48205.1| 146|Homo sapiens KRTCAP2 protein protein.
Length = 146
Score = 109 bits (262), Expect = 1e-23
Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Frame = +1
Query: 115 GXXAVXRAXSFVLSSIFTLLLFSGMQMYQXXXXXXXXXXXXXXXXXXXMFMFFVTAVGNL 294
G V S LSS+ +LLLF+GMQMY +F+F +TA NL
Sbjct: 9 GMMVVGTGTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL 68
Query: 295 EXILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTCLIFCVITIYYMNKLSQKKYAV 471
E ++FGK FQ K+ PE++L + ++L A+G++HR+C TTC IF ++ +YY+NK+S Y
Sbjct: 69 ENLVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQA 128
Query: 472 VAP--QPAXVKSRRHK*N 519
AP PA V + K N
Sbjct: 129 AAPVLTPAKVTGKSKKRN 146
>BC029806-1|AAH29806.1| 162|Homo sapiens keratinocyte associated
protein 2 protein.
Length = 162
Score = 109 bits (262), Expect = 1e-23
Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Frame = +1
Query: 115 GXXAVXRAXSFVLSSIFTLLLFSGMQMYQXXXXXXXXXXXXXXXXXXXMFMFFVTAVGNL 294
G V S LSS+ +LLLF+GMQMY +F+F +TA NL
Sbjct: 25 GMMVVGTGTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL 84
Query: 295 EXILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTCLIFCVITIYYMNKLSQKKYAV 471
E ++FGK FQ K+ PE++L + ++L A+G++HR+C TTC IF ++ +YY+NK+S Y
Sbjct: 85 ENLVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQA 144
Query: 472 VAP--QPAXVKSRRHK*N 519
AP PA V + K N
Sbjct: 145 AAPVLTPAKVTGKSKKRN 162
>AL607067-2|CAH71196.1| 162|Homo sapiens keratinocyte associated
protein 2 protein.
Length = 162
Score = 109 bits (262), Expect = 1e-23
Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Frame = +1
Query: 115 GXXAVXRAXSFVLSSIFTLLLFSGMQMYQXXXXXXXXXXXXXXXXXXXMFMFFVTAVGNL 294
G V S LSS+ +LLLF+GMQMY +F+F +TA NL
Sbjct: 25 GMMVVGTGTSLALSSLLSLLLFAGMQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNL 84
Query: 295 EXILFGKAFQLKL-PEVVLSMGISLIAAGMVHRICFTTCLIFCVITIYYMNKLSQKKYAV 471
E ++FGK FQ K+ PE++L + ++L A+G++HR+C TTC IF ++ +YY+NK+S Y
Sbjct: 85 ENLVFGKGFQAKIFPEILLCLLLALFASGLIHRVCVTTCFIFSMVGLYYINKISSTLYQA 144
Query: 472 VAP--QPAXVKSRRHK*N 519
AP PA V + K N
Sbjct: 145 AAPVLTPAKVTGKSKKRN 162
>AY157577-1|AAO13161.2| 114|Homo sapiens keratinocytes associated
protein 2 protein.
Length = 114
Score = 87.4 bits (207), Expect = 6e-17
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Frame = +1
Query: 187 MQMYQXXXXXXXXXXXXXXXXXXXMFMFFVTAVGNLEXILFGKAFQLKL-PEVVLSMGIS 363
MQMY +F+F +TA NLE ++FGK FQ K+ PE++L + ++
Sbjct: 1 MQMYSRQLASTEWLTIQGGLLGSGLFVFSLTAFNNLENLVFGKGFQAKIFPEILLCLLLA 60
Query: 364 LIAAGMVHRICFTTCLIFCVITIYYMNKLSQKKYAVVAP--QPAXVKSRRHK*N 519
L A+ ++HR+C TTC IF ++ +YY+NK+S Y AP PA V + K N
Sbjct: 61 LFASSLIHRVCVTTCFIFSMVGLYYINKISSTLYQAAAPVLTPAKVTGKSKKRN 114
>BC004355-1|AAH04355.1| 218|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide G (32kD)-like protein.
Length = 218
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 356 PIDSTTSGNFNWNALPNRIXSRLPTAVTKNMNIXEPREPPK 234
PID+ N +W LP + R+ + + I P+ PPK
Sbjct: 99 PIDNAIDWNPDWRRLPRELKIRVRKLQKERITILLPKRPPK 139
>AK056984-1|BAB71332.1| 218|Homo sapiens protein ( Homo sapiens
cDNA FLJ32422 fis, clone SKMUS2000933, weakly similar to
RNA polymerase III subunit. ).
Length = 218
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 356 PIDSTTSGNFNWNALPNRIXSRLPTAVTKNMNIXEPREPPK 234
PID+ N +W LP + R+ + + I P+ PPK
Sbjct: 99 PIDNAIDWNPDWRRLPRELKIRVRKLQKERITILLPKRPPK 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,011,816
Number of Sequences: 237096
Number of extensions: 1456088
Number of successful extensions: 1790
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1780
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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