Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_E13
         (875 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23454-5|AAC46516.1|   84|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protei...    28   7.6  
AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN phosphat...    28   7.6  
AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.     28   7.6  
AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dau...    28   7.6  

>U23454-5|AAC46516.1|   84|Caenorhabditis elegans Hypothetical
           protein C10A4.2 protein.
          Length = 84

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 397 FTTCLIFCVITIYYMNKLSQKKYAVVAPQPAXVKS 501
           F  CL+  ++ + Y+      KY V  PQPA   S
Sbjct: 8   FDICLVIALVIVNYLPDTPVSKYRVGPPQPAEYMS 42


>AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protein
           protein.
          Length = 962

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 387 QDLFHHMPHFLRDNHLLHE*VIAKKVCGSCPSTSXSEKPST 509
           Q  FH   H++++   +     AK +  + PSTS S  P T
Sbjct: 664 QPFFHSPEHYIKEQEKIDAEKAAKGIENTGPSTSGSSAPGT 704


>AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN
           phosphatidylinositol 3' phosphatasehomolog DAF-18
           protein.
          Length = 962

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 387 QDLFHHMPHFLRDNHLLHE*VIAKKVCGSCPSTSXSEKPST 509
           Q  FH   H++++   +     AK +  + PSTS S  P T
Sbjct: 664 QPFFHSPEHYIKEQEKIDAEKAAKGIENTGPSTSGSSAPGT 704


>AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.
          Length = 962

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 387 QDLFHHMPHFLRDNHLLHE*VIAKKVCGSCPSTSXSEKPST 509
           Q  FH   H++++   +     AK +  + PSTS S  P T
Sbjct: 664 QPFFHSPEHYIKEQEKIDAEKAAKGIENTGPSTSGSSAPGT 704


>AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dauer
           formation protein 18 protein.
          Length = 962

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 387 QDLFHHMPHFLRDNHLLHE*VIAKKVCGSCPSTSXSEKPST 509
           Q  FH   H++++   +     AK +  + PSTS S  P T
Sbjct: 664 QPFFHSPEHYIKEQEKIDAEKAAKGIENTGPSTSGSSAPGT 704


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,448,496
Number of Sequences: 27780
Number of extensions: 214829
Number of successful extensions: 507
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)