Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_E12
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 59 5e-09
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 59 5e-09
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 39 0.004
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 35 0.087
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 33 0.27
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 31 0.81
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 31 0.81
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +3
Query: 324 WDEGVXXMSVGXRAKLTCSPDYAYGQXGXPGVIPPNSTLIFDVXLL 461
WD+GV MSVG ++KLT S D YG G P IP N+TL+F+V LL
Sbjct: 60 WDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +3
Query: 324 WDEGVXXMSVGXRAKLTCSPDYAYGQXGXPGVIPPNSTLIFDVXLL 461
WD+GV MSVG ++KLT S D YG G P IP N+TL+F+V LL
Sbjct: 60 WDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +3
Query: 324 WDEGVXXMSVGXRAKLTCSPDYAYGQXGXPGVIPPNSTLIFDVXLLRLE 470
WD+G+ M VG R LT P YG+ G P IP NS L FDV L++++
Sbjct: 85 WDQGLLNMCVGERRILTIPPHLGYGERGAPPKIPGNSVLKFDVELMKID 133
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +3
Query: 324 WDEGVXXMSVGXRAKLTCSPDYAYGQXGXPGVIPPNSTLIFDVXL 458
WD GV M+ G A+ T DY YG G P IP +TLIF+V L
Sbjct: 73 WDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVEL 117
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 327 DEGVXXMSVGXRAKLTCSPDYAYGQXGXPGVIPPNSTLIFDVXLLRL 467
D + M G + K+ P+ AYG+ G P IP NS L FD+ L +L
Sbjct: 207 DIAMEGMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSLEKL 253
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 34.7 bits (76), Expect = 0.087
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 327 DEGVXXMSVGXRAKLTCSPDYAYGQXGXPGVIPPNSTLIFDVXL 458
D G+ M VG A S Y YG+ G G+IP N++L V L
Sbjct: 143 DIGIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASLTCKVRL 186
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 324 WDEGVXXMSVGXRAKLTCSPDYAYGQXGXPGVIP 425
WD+GV MSV ++KLT +P + + + P IP
Sbjct: 256 WDQGVAQMSVKEKSKLTIAPAFGFEKGKLPAGIP 289
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 327 DEGVXXMSVGXRAKLTCSPDYAYGQXGXPGVIPPNSTLIFDVXLLRL 467
D + M G R ++ +Y YG G P IP + L F++ L +L
Sbjct: 207 DIAMDGMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVLEKL 253
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 327 DEGVXXMSVGXRAKLTCSPDYAYGQXGXPGVIPPNSTLIFDVXLLRL 467
D + M G R ++ D+ YG G IP + L FD+ L +L
Sbjct: 212 DIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 258
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 327 DEGVXXMSVGXRAKLTCSPDYAYGQXGXPGVIPPNSTLIFDVXLLRL 467
D + M G R ++ D+ YG G IP + L FD+ L +L
Sbjct: 248 DIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,171,680
Number of Sequences: 27780
Number of extensions: 93835
Number of successful extensions: 165
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -