Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_E07
         (946 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical p...    31   1.2  
U42830-3|AAC48275.1|  195|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z81097-4|CAB03176.1|  100|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z81530-5|CAB04309.2|  287|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical
           protein C25E10.10 protein.
          Length = 169

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +1

Query: 205 CPQMAEPXCXHPEVXXFVDHVGPCXVPQCFCDRPNVRNTKTGKCVPESEC 354
           C    EP C +       D V  C    C C +  VR++ TGKCV +++C
Sbjct: 86  CGSACEPTCDNENPEC--DLV--CMTNVCQCKKGLVRDSATGKCVEKNKC 131


>U42830-3|AAC48275.1|  195|Caenorhabditis elegans Hypothetical
           protein C53B7.2 protein.
          Length = 195

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +1

Query: 205 CPQMAEPXCXHPEVXXFVDHVGPCXVPQCFCDRPNVRNTKTGKCVPESEC 354
           C QM  P C  P     VD    C  P C C  P    + + +C+P + C
Sbjct: 38  CTQMCPPTCESPNPQCRVD----CTRPSCTC-LPGHVYSNSRQCIPANSC 82


>Z81097-4|CAB03176.1|  100|Caenorhabditis elegans Hypothetical
           protein K07A1.6 protein.
          Length = 100

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
 Frame = +1

Query: 205 CPQMAEPXCXHPEVXXFVDHVGPCXVPQCFCDRPNVR-NTKTGKCVPESEC 354
           C    E  C HP    F     PC    C C+    R N  TG+CV    C
Sbjct: 47  CGNGCEKSCTHPRQPPFSQCKLPCIPYSCRCNPGFYRDNQGTGRCVRLRRC 97


>Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical
           protein M02G9.2 protein.
          Length = 398

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 271 PCXVPQCFCDRPNVRNTKTGKCVPESEC**NCVN 372
           P   P+C C   NVRN  TG  +P      NCV+
Sbjct: 59  PPVPPKCVCTEGNVRNIITGPSLPALFKPYNCVS 92


>Z81530-5|CAB04309.2|  287|Caenorhabditis elegans Hypothetical
           protein F36D1.6 protein.
          Length = 287

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = +1

Query: 169 VXCPXGAXSVLYCPQMAEPXCXHPEVXXFVDHVGPCXVPQCFCDRPNVRN 318
           +  P  A  + YCP M E    HP +  F D       P C  D  N+ N
Sbjct: 148 IATPVKAYILNYCPNMTEHVAYHPMIIEF-DDTFTNSTP-CLSDEVNIGN 195


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,987,350
Number of Sequences: 27780
Number of extensions: 113897
Number of successful extensions: 218
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)