Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_E03
(822 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous ... 31 2.5
X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein. 30 3.3
X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP pro... 30 4.4
AY094733-1|AAM11086.1| 404|Drosophila melanogaster GH26759p pro... 29 5.8
AY075578-1|AAL68383.1| 531|Drosophila melanogaster SD05950p pro... 29 5.8
AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ank... 29 5.8
AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-P... 29 5.8
AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-P... 29 5.8
BT029119-1|ABJ17052.1| 650|Drosophila melanogaster IP15483p pro... 29 7.7
AY061421-1|AAL28969.1| 300|Drosophila melanogaster LD35248p pro... 29 7.7
AF182826-1|AAF01031.1| 300|Drosophila melanogaster cyclophilin-... 29 7.7
AE014134-143|AAF51465.2| 1305|Drosophila melanogaster CG3022-PA,... 29 7.7
AE013599-2502|AAF57839.1| 300|Drosophila melanogaster CG4886-PA... 29 7.7
>X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 386
Score = 30.7 bits (66), Expect = 2.5
Identities = 35/131 (26%), Positives = 44/131 (33%), Gaps = 2/131 (1%)
Frame = +2
Query: 179 GWQPSRRHPRDVTWDKQMGGGKVFGTLGXNDDGLFG--KAGYNREIFNDDRGKLTGQAYG 352
GW R W + GGG FG G N G G G+N++ G Q G
Sbjct: 225 GWGGQNRQNGGGNWGGRGGGGG-FGNSGGNFGGGQGGGSGGWNQQ-GGTGGGPWNNQGGG 282
Query: 353 TRVLGPGGDSTNYGGRLDWANKNAQATIDLNRXIGGRSGMTASGSGVWDLDKNTHFSAGG 532
GG YGG N N GG G G G + + + G
Sbjct: 283 NGGWNGGGGGGGYGG----GNSNGS--------WGGNGGGGGGGGGFGN-EYQQSYGGGP 329
Query: 533 MVSKEFGHKRP 565
+ FG+ RP
Sbjct: 330 QRNSNFGNNRP 340
>X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein.
Length = 386
Score = 30.3 bits (65), Expect = 3.3
Identities = 35/131 (26%), Positives = 43/131 (32%), Gaps = 2/131 (1%)
Frame = +2
Query: 179 GWQPSRRHPRDVTWDKQMGGGKVFGTLGXNDDGLFG--KAGYNREIFNDDRGKLTGQAYG 352
GW R W GGG FG G N G G G+N++ G Q G
Sbjct: 225 GWGGQNRQNGGGNWGGAGGGGG-FGNSGGNFGGGQGGGSGGWNQQ-GGSGGGPWNNQGGG 282
Query: 353 TRVLGPGGDSTNYGGRLDWANKNAQATIDLNRXIGGRSGMTASGSGVWDLDKNTHFSAGG 532
GG YGG N N GG G G G + + + G
Sbjct: 283 NGGWNGGGGGGGYGG----GNSNGS--------WGGNGGGGGGGGGFGN-EYQQSYGGGP 329
Query: 533 MVSKEFGHKRP 565
+ FG+ RP
Sbjct: 330 QRNSNFGNNRP 340
>X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP
protein) protein.
Length = 386
Score = 29.9 bits (64), Expect = 4.4
Identities = 35/131 (26%), Positives = 43/131 (32%), Gaps = 2/131 (1%)
Frame = +2
Query: 179 GWQPSRRHPRDVTWDKQMGGGKVFGTLGXNDDGLFG--KAGYNREIFNDDRGKLTGQAYG 352
GW R W GGG FG G N G G G+N++ G Q G
Sbjct: 225 GWGGQNRQNGGGNWGGAGGGGG-FGNSGGNFGGGQGGGSGGWNQQ-GGTGGGPWNNQGGG 282
Query: 353 TRVLGPGGDSTNYGGRLDWANKNAQATIDLNRXIGGRSGMTASGSGVWDLDKNTHFSAGG 532
GG YGG N N GG G G G + + + G
Sbjct: 283 NGGWNGGGGGGGYGG----GNSNGS--------WGGNGGGGGGGGGFGN-EYQQSYGGGP 329
Query: 533 MVSKEFGHKRP 565
+ FG+ RP
Sbjct: 330 QRNSNFGNNRP 340
>AY094733-1|AAM11086.1| 404|Drosophila melanogaster GH26759p
protein.
Length = 404
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 287 KAGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTN--YGGRLDWANKNAQATIDLNRXIGG 460
+ G +F + G+ Q GT PGG + YGG L++ + + + L GG
Sbjct: 161 QGGTQSNVFGGNPGR---QPPGTGARQPGGAAAQRWYGGTLEYPSYTGRDMLHLENGAGG 217
Query: 461 RSGM 472
+GM
Sbjct: 218 MAGM 221
>AY075578-1|AAL68383.1| 531|Drosophila melanogaster SD05950p
protein.
Length = 531
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 287 KAGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTN--YGGRLDWANKNAQATIDLNRXIGG 460
+ G +F + G+ Q GT PGG + YGG L++ + + + L GG
Sbjct: 288 QGGTQSNVFGGNPGR---QPPGTGARQPGGAAAQRWYGGTLEYPSYTGRDMLHLENGAGG 344
Query: 461 RSGM 472
+GM
Sbjct: 345 MAGM 348
>AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ankyrin
repeat singleKH domain protein protein.
Length = 4001
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 287 KAGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTN--YGGRLDWANKNAQATIDLNRXIGG 460
+ G +F + G+ Q GT PGG + YGG L++ + + + L GG
Sbjct: 3758 QGGTQSNVFGGNPGR---QPPGTGARQPGGAAAQRWYGGTLEYPSYTGRDMLHLENGAGG 3814
Query: 461 RSGM 472
+GM
Sbjct: 3815 MAGM 3818
>AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-PB,
isoform B protein.
Length = 4001
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 287 KAGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTN--YGGRLDWANKNAQATIDLNRXIGG 460
+ G +F + G+ Q GT PGG + YGG L++ + + + L GG
Sbjct: 3758 QGGTQSNVFGGNPGR---QPPGTGARQPGGAAAQRWYGGTLEYPSYTGRDMLHLENGAGG 3814
Query: 461 RSGM 472
+GM
Sbjct: 3815 MAGM 3818
>AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-PA,
isoform A protein.
Length = 4001
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 287 KAGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTN--YGGRLDWANKNAQATIDLNRXIGG 460
+ G +F + G+ Q GT PGG + YGG L++ + + + L GG
Sbjct: 3758 QGGTQSNVFGGNPGR---QPPGTGARQPGGAAAQRWYGGTLEYPSYTGRDMLHLENGAGG 3814
Query: 461 RSGM 472
+GM
Sbjct: 3815 MAGM 3818
>BT029119-1|ABJ17052.1| 650|Drosophila melanogaster IP15483p
protein.
Length = 650
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +2
Query: 290 AGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTNYGGRLDWANKNAQATIDLNRXIGGRSG 469
+G N +FN K + Q +G G G YG R+ A + + R +GG SG
Sbjct: 426 SGLNNHMFNSQLRKQSAQFHGQDGFGSG-----YGSRISIAATQSDSRRRRRRGVGGTSG 480
>AY061421-1|AAL28969.1| 300|Drosophila melanogaster LD35248p
protein.
Length = 300
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 266 NDDGLFGKAGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTN 388
N++G GK+ Y ++ FND+ L ++GT + G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243
>AF182826-1|AAF01031.1| 300|Drosophila melanogaster cyclophilin-33
protein.
Length = 300
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 266 NDDGLFGKAGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTN 388
N++G GK+ Y ++ FND+ L ++GT + G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243
>AE014134-143|AAF51465.2| 1305|Drosophila melanogaster CG3022-PA,
isoform A protein.
Length = 1305
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +2
Query: 290 AGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTNYGGRLDWANKNAQATIDLNRXIGGRSG 469
+G N +FN K + Q +G G G YG R+ A + + R +GG SG
Sbjct: 426 SGLNNHMFNSQLRKQSAQFHGQDGFGSG-----YGSRISIAATQSDSRRRRRRGVGGTSG 480
>AE013599-2502|AAF57839.1| 300|Drosophila melanogaster CG4886-PA
protein.
Length = 300
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 266 NDDGLFGKAGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTN 388
N++G GK+ Y ++ FND+ L ++GT + G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,795,261
Number of Sequences: 53049
Number of extensions: 461095
Number of successful extensions: 1024
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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