Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_D24
         (877 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    34   0.12 
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    34   0.12 

>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 590 LIRTRSAXPQXXFSFNAIYFXXAWXSXFDXRLTSXRDFYVSQXXXIXVPMM 742
           LI   SA     F  NA+YF   W S F    T+ R+F+ S+     +P +
Sbjct: 140 LIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFL 190


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 590 LIRTRSAXPQXXFSFNAIYFXXAWXSXFDXRLTSXRDFYVSQXXXIXVPMM 742
           LI   SA     F  NA+YF   W S F    T+ R+F+ S+     +P +
Sbjct: 140 LIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFL 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,042,739
Number of Sequences: 27780
Number of extensions: 56663
Number of successful extensions: 49
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)