Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_D22
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.029
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.48
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 31 1.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.9
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 30 2.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.4
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 3.4
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 3.4
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.5
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 7.8
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 28 7.8
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 36.3 bits (80), Expect = 0.029
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Frame = +1
Query: 655 PXXGPXKNGEGXGXFXKXPPPPKKXKKXXXSXXGGPPPPXKKNXXXF--PPKXXP---XA 819
P GP + G G F PPP++ GGPPPP F PP+ P A
Sbjct: 334 PPQGPPQGGPPQGSFGA--PPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFA 391
Query: 820 PP 825
PP
Sbjct: 392 PP 393
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/55 (27%), Positives = 21/55 (38%)
Frame = +1
Query: 691 GXFXKXPPPPKKXKKXXXSXXGGPPPPXKKNXXXFPPKXXPXAPPFXXHPRXKKK 855
G PPPP +K PPPP + PP+ P P P +++
Sbjct: 116 GDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRR 170
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Frame = -3
Query: 853 FFXXAGGXKXGXXXGXFX-GGXPXG-----FFLXGGVAPPXGXXXFFXFFWGGGG 707
+F AGG G F GG P G + GG APP G + GGGG
Sbjct: 5 YFGVAGGSNTGAQSAYFGVGGGPAGGGGGASKVGGGAAPPPGTSVYMGAGGGGGG 59
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 709 PPPPKKXKKXXXSXXGGPPPPXKKNXXXFPPKXXPXAPPFXXHP 840
PPPP + G PPPP P P PP P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 281
Score = 30.3 bits (65), Expect = 1.9
Identities = 29/127 (22%), Positives = 35/127 (27%), Gaps = 5/127 (3%)
Frame = +1
Query: 478 PPPXGXGGXXLGXXPXXPXKKXXXXXXXXXXXXXPPPXGXXGFPXXRGXXXKKNFFXXXP 657
PPP G L P PPP P G P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 658 XXGPXKNGEGXGXFXKXPPPPKKXKKXXXSXXGGPPPPXKKN---XXXFPPKXXP--XAP 822
P + G PPP+ + G PPPP ++ PP P +P
Sbjct: 299 PPPPPRGSPPTGSL----PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 354
Query: 823 PFXXHPR 843
P PR
Sbjct: 355 PTGRPPR 361
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 709 PPPPKKXKKXXXSXXGGPPPPXKKNXXXFPPKXXPXAPPFXXHP 840
PPPP + G PPPP P P PP P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 302
Score = 30.3 bits (65), Expect = 1.9
Identities = 29/127 (22%), Positives = 35/127 (27%), Gaps = 5/127 (3%)
Frame = +1
Query: 478 PPPXGXGGXXLGXXPXXPXKKXXXXXXXXXXXXXPPPXGXXGFPXXRGXXXKKNFFXXXP 657
PPP G L P PPP P G P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 658 XXGPXKNGEGXGXFXKXPPPPKKXKKXXXSXXGGPPPPXKKN---XXXFPPKXXP--XAP 822
P + G PPP+ + G PPPP ++ PP P +P
Sbjct: 320 PPPPPRGSPPTGSL----PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 375
Query: 823 PFXXHPR 843
P PR
Sbjct: 376 PTGRPPR 382
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 709 PPPPKKXKKXXXSXXGGPPPPXKKNXXXFPPKXXPXAPPFXXHP 840
PPPP + G PPPP P P PP P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 287
Score = 30.3 bits (65), Expect = 1.9
Identities = 29/127 (22%), Positives = 35/127 (27%), Gaps = 5/127 (3%)
Frame = +1
Query: 478 PPPXGXGGXXLGXXPXXPXKKXXXXXXXXXXXXXPPPXGXXGFPXXRGXXXKKNFFXXXP 657
PPP G L P PPP P G P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 658 XXGPXKNGEGXGXFXKXPPPPKKXKKXXXSXXGGPPPPXKKN---XXXFPPKXXP--XAP 822
P + G PPP+ + G PPPP ++ PP P +P
Sbjct: 305 PPPPPRGSPPTGSL----PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 360
Query: 823 PFXXHPR 843
P PR
Sbjct: 361 PTGRPPR 367
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 673 KNGEGXGXFXKXPPPPKKXKKXXXSXXGGPPPPXKKNXXXFPP 801
K +G F K PPPP ++ PPPP +K PP
Sbjct: 8 KLDDGDNRFRKQPPPPPSPRR------APPPPPHRKPASLSPP 44
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +1
Query: 655 PXXGPXKNGEGXGXFXKXPPPPKKXKKXXXSXXGGPPPPXKKNXXXF-PPKXXPXAPPF 828
P P +G PPPP + + + PPPP P + P AP +
Sbjct: 540 PSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNY 598
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +1
Query: 655 PXXGPXKNGEGXGXFXKXPPPPKKXKKXXXSXXGGPPPPXKKNXXXF-PPKXXPXAPPF 828
P P +G PPPP + + + PPPP P + P AP +
Sbjct: 366 PSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNY 424
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +1
Query: 664 GPXKNGEGXGXFXKXPPPPKKXKKXXXSXXGGPPPPXKKNXXXFPPKXXPXAP 822
GP G+ G PP ++ GPPPP ++ +PP P P
Sbjct: 692 GPPPPGQPYGPPGGYPPQQQRPP-YQAQPYPGPPPPQQQRGYGYPPPPQPGHP 743
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +1
Query: 664 GPXKNGEGXGXFXKXPPPPKKXKKXXXSXXGGPPPPXKKNXXXFPPKXXPXAP 822
GP G+ G PP ++ GPPPP ++ +PP P P
Sbjct: 692 GPPPPGQPYGPPGGYPPQQQRPP-YQAQPYPGPPPPQQQRGYGYPPPPQPGHP 743
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 294 PXXFFFXXGPPPPPXXXXPPP 232
P FF PPPPP PPP
Sbjct: 777 PPPFFALPVPPPPPVPPPPPP 797
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 286 FFFXXGXPPPPXKXXPPPPF 227
FF PPPP PPPPF
Sbjct: 780 FFALPVPPPPPVPPPPPPPF 799
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +1
Query: 709 PPPPKKXKKXXXSXXGGPPPPXKKNXXXFPPKXXPXAP 822
PPPP + PPPP + PP P P
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +1
Query: 709 PPPPKKXKKXXXSXXGGPPPPXKKNXXXFPPKXXPXAP 822
PPPP + PPPP + PP P P
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 697 FXKXPPPPKKXKKXXXSXXGGPPPPXKKNXXXFPPKXXPXAPPFXXHPRXKKKKXXXFXP 876
F + PPPP GPPPP +N PP P PP+ P ++ P
Sbjct: 20 FFERPPPPDWFFPGPLRPW-GPPPPWHRNRG--PPPFGP-PPPWDRPPPPWRRPPWHRRP 75
Query: 877 P 879
P
Sbjct: 76 P 76
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 839 GWXXXGGAXGXFXGGXXXXFFFXGGGG 759
GW GG G GG + + GGGG
Sbjct: 246 GWGGGGGGRGYGGGGGGGGYGYGGGGG 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.153 0.528
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,888,930
Number of Sequences: 27780
Number of extensions: 251991
Number of successful extensions: 2413
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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