Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_D16
(867 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternati... 129 1e-29
M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein. 129 1e-29
BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor, argini... 129 1e-29
AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein. 129 1e-29
M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternati... 121 3e-27
BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein. 121 3e-27
AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor, argini... 121 3e-27
U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c pr... 109 2e-23
U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein. 109 2e-23
BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor, argini... 109 2e-23
BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor, argini... 109 2e-23
AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor, argini... 109 2e-23
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 52 3e-06
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 52 3e-06
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 52 3e-06
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 52 3e-06
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 52 3e-06
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 52 3e-06
AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein. 52 3e-06
U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein. 50 1e-05
BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor, argini... 50 1e-05
BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor, argini... 50 1e-05
BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor, argini... 50 1e-05
AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor, argini... 42 0.002
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 41 0.005
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 41 0.005
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 41 0.005
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 40 0.012
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 40 0.012
U30884-1|AAA93074.1| 107|Homo sapiens SRp40-2 protein. 36 0.25
U30827-1|AAB60405.1| 107|Homo sapiens SRp40-3 protein. 36 0.25
CR542182-1|CAG46979.1| 107|Homo sapiens SFRS5 protein. 36 0.25
CR542167-1|CAG46964.1| 107|Homo sapiens SFRS5 protein. 36 0.25
BX640605-1|CAE45711.1| 107|Homo sapiens hypothetical protein pr... 36 0.25
BC095420-1|AAH95420.1| 107|Homo sapiens SFRS5 protein protein. 36 0.25
AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant pr... 36 0.25
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 31 5.4
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 31 5.4
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 31 5.4
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 31 5.4
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 31 5.4
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 31 5.4
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 31 5.4
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 31 5.4
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 31 5.4
AF284423-1|AAG14457.1| 140|Homo sapiens RNA-binding protein BRU... 31 5.4
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 31 5.4
AF048730-1|AAC39664.1| 726|Homo sapiens cyclin T1 protein. 30 9.5
AF045161-1|AAC39638.1| 726|Homo sapiens cyclin T protein. 30 9.5
>M72709-2|AAA35565.1| 248|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 248
Score = 129 bits (312), Expect = 1e-29
Identities = 74/179 (41%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXG-PPFAFVXFXXPXXAXXAVXAXX 386
CR YVG LPP R +FY +G + +DLK G PPFAFV F P A AV
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 387 GXXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGS 566
G Y G RLRV F E RV+V+GLP SGS
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGS 133
Query: 567 WXXLKDHMRXAGDVCFAXXFKXGSGVVXFLXXXXMXXAVXXLXXSRFRXPXGXVXYIRV 743
W LKDHMR AGDVC+A ++ G+GVV F+ M AV L ++FR G YIRV
Sbjct: 134 WQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV 192
>M69040-1|AAA03476.1| 248|Homo sapiens SF2p33 protein.
Length = 248
Score = 129 bits (312), Expect = 1e-29
Identities = 74/179 (41%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXG-PPFAFVXFXXPXXAXXAVXAXX 386
CR YVG LPP R +FY +G + +DLK G PPFAFV F P A AV
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 387 GXXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGS 566
G Y G RLRV F E RV+V+GLP SGS
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGS 133
Query: 567 WXXLKDHMRXAGDVCFAXXFKXGSGVVXFLXXXXMXXAVXXLXXSRFRXPXGXVXYIRV 743
W LKDHMR AGDVC+A ++ G+GVV F+ M AV L ++FR G YIRV
Sbjct: 134 WQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV 192
>BC010264-1|AAH10264.1| 248|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 248
Score = 129 bits (312), Expect = 1e-29
Identities = 74/179 (41%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXG-PPFAFVXFXXPXXAXXAVXAXX 386
CR YVG LPP R +FY +G + +DLK G PPFAFV F P A AV
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 387 GXXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGS 566
G Y G RLRV F E RV+V+GLP SGS
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGS 133
Query: 567 WXXLKDHMRXAGDVCFAXXFKXGSGVVXFLXXXXMXXAVXXLXXSRFRXPXGXVXYIRV 743
W LKDHMR AGDVC+A ++ G+GVV F+ M AV L ++FR G YIRV
Sbjct: 134 WQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV 192
>AB062124-1|BAB93456.1| 248|Homo sapiens OK/SW-cl.3 protein.
Length = 248
Score = 129 bits (312), Expect = 1e-29
Identities = 74/179 (41%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXG-PPFAFVXFXXPXXAXXAVXAXX 386
CR YVG LPP R +FY +G + +DLK G PPFAFV F P A AV
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 387 GXXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGS 566
G Y G RLRV F E RV+V+GLP SGS
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGS 133
Query: 567 WXXLKDHMRXAGDVCFAXXFKXGSGVVXFLXXXXMXXAVXXLXXSRFRXPXGXVXYIRV 743
W LKDHMR AGDVC+A ++ G+GVV F+ M AV L ++FR G YIRV
Sbjct: 134 WQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV 192
>M72709-1|AAA35564.1| 292|Homo sapiens protein ( Human alternative
splicing factor mRNA, complete cds. ).
Length = 292
Score = 121 bits (292), Expect = 3e-27
Identities = 69/168 (41%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXG-PPFAFVXFXXPXXAXXAVXAXX 386
CR YVG LPP R +FY +G + +DLK G PPFAFV F P A AV
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 387 GXXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGS 566
G Y G RLRV F E RV+V+GLP SGS
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGS 133
Query: 567 WXXLKDHMRXAGDVCFAXXFKXGSGVVXFLXXXXMXXAVXXLXXSRFR 710
W LKDHMR AGDVC+A ++ G+GVV F+ M AV L ++FR
Sbjct: 134 WQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 181
>BC033785-1|AAH33785.1| 201|Homo sapiens SFRS1 protein protein.
Length = 201
Score = 121 bits (292), Expect = 3e-27
Identities = 69/168 (41%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXG-PPFAFVXFXXPXXAXXAVXAXX 386
CR YVG LPP R +FY +G + +DLK G PPFAFV F P A AV
Sbjct: 16 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 75
Query: 387 GXXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGS 566
G Y G RLRV F E RV+V+GLP SGS
Sbjct: 76 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGS 133
Query: 567 WXXLKDHMRXAGDVCFAXXFKXGSGVVXFLXXXXMXXAVXXLXXSRFR 710
W LKDHMR AGDVC+A ++ G+GVV F+ M AV L ++FR
Sbjct: 134 WQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 181
>AB209558-1|BAD92795.1| 233|Homo sapiens splicing factor,
arginine/serine-rich 1 (splicing factor 2, alternate
splicing protein.
Length = 233
Score = 121 bits (292), Expect = 3e-27
Identities = 69/168 (41%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXG-PPFAFVXFXXPXXAXXAVXAXX 386
CR YVG LPP R +FY +G + +DLK G PPFAFV F P A AV
Sbjct: 48 CRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRD 107
Query: 387 GXXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGS 566
G Y G RLRV F E RV+V+GLP SGS
Sbjct: 108 GYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRS--ENRVVVSGLPPSGS 165
Query: 567 WXXLKDHMRXAGDVCFAXXFKXGSGVVXFLXXXXMXXAVXXLXXSRFR 710
W LKDHMR AGDVC+A ++ G+GVV F+ M AV L ++FR
Sbjct: 166 WQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFR 213
>U87279-1|AAD00626.1| 221|Homo sapiens splicing factor SRp30c
protein.
Length = 221
Score = 109 bits (261), Expect = 2e-23
Identities = 68/178 (38%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXG-PPFAFVXFXXPXXAXXAVXAXXG 389
R YVG LP R LFY +G + ++LK G PFAFV F P A A+ G
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 390 XXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGSW 569
Y RLRV F ++RVLV+GLP SGSW
Sbjct: 75 YDYGQCRLRVEFPRTYGGRGGWPRGGRNGPPTRRS----------DFRVLVSGLPPSGSW 124
Query: 570 XXLKDHMRXAGDVCFAXXFKXGSGVVXFLXXXXMXXAVXXLXXSRFRXPXGXVXYIRV 743
LKDHMR AGDVC+A K G G+V +L M A+ L ++FR G YIRV
Sbjct: 125 QDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>U30825-1|AAA93069.1| 221|Homo sapiens SRp30c protein.
Length = 221
Score = 109 bits (261), Expect = 2e-23
Identities = 68/178 (38%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXG-PPFAFVXFXXPXXAXXAVXAXXG 389
R YVG LP R LFY +G + ++LK G PFAFV F P A A+ G
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 390 XXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGSW 569
Y RLRV F ++RVLV+GLP SGSW
Sbjct: 75 YDYGQCRLRVEFPRTYGGRGGWPRGGRNGPPTRRS----------DFRVLVSGLPPSGSW 124
Query: 570 XXLKDHMRXAGDVCFAXXFKXGSGVVXFLXXXXMXXAVXXLXXSRFRXPXGXVXYIRV 743
LKDHMR AGDVC+A K G G+V +L M A+ L ++FR G YIRV
Sbjct: 125 QDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>BC093973-1|AAH93973.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 109 bits (261), Expect = 2e-23
Identities = 68/178 (38%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXG-PPFAFVXFXXPXXAXXAVXAXXG 389
R YVG LP R LFY +G + ++LK G PFAFV F P A A+ G
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 390 XXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGSW 569
Y RLRV F ++RVLV+GLP SGSW
Sbjct: 75 YDYGQCRLRVEFPRTYGGRGGWPRGGRNGPPTRRS----------DFRVLVSGLPPSGSW 124
Query: 570 XXLKDHMRXAGDVCFAXXFKXGSGVVXFLXXXXMXXAVXXLXXSRFRXPXGXVXYIRV 743
LKDHMR AGDVC+A K G G+V +L M A+ L ++FR G YIRV
Sbjct: 125 QDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>BC093971-1|AAH93971.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 109 bits (261), Expect = 2e-23
Identities = 68/178 (38%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXG-PPFAFVXFXXPXXAXXAVXAXXG 389
R YVG LP R LFY +G + ++LK G PFAFV F P A A+ G
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 390 XXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGSW 569
Y RLRV F ++RVLV+GLP SGSW
Sbjct: 75 YDYGQCRLRVEFPRTYGGRGGWPRGGRNGPPTRRS----------DFRVLVSGLPPSGSW 124
Query: 570 XXLKDHMRXAGDVCFAXXFKXGSGVVXFLXXXXMXXAVXXLXXSRFRXPXGXVXYIRV 743
LKDHMR AGDVC+A K G G+V +L M A+ L ++FR G YIRV
Sbjct: 125 QDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>AL021546-5|CAA16498.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 9 protein.
Length = 221
Score = 109 bits (261), Expect = 2e-23
Identities = 68/178 (38%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXG-PPFAFVXFXXPXXAXXAVXAXXG 389
R YVG LP R LFY +G + ++LK G PFAFV F P A A+ G
Sbjct: 15 RIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRNG 74
Query: 390 XXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGSW 569
Y RLRV F ++RVLV+GLP SGSW
Sbjct: 75 YDYGQCRLRVEFPRTYGGRGGWPRGGRNGPPTRRS----------DFRVLVSGLPPSGSW 124
Query: 570 XXLKDHMRXAGDVCFAXXFKXGSGVVXFLXXXXMXXAVXXLXXSRFRXPXGXVXYIRV 743
LKDHMR AGDVC+A K G G+V +L M A+ L ++FR G YIRV
Sbjct: 125 QDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 182
>L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor
protein.
Length = 494
Score = 52.0 bits (119), Expect = 3e-06
Identities = 45/162 (27%), Positives = 57/162 (35%), Gaps = 2/162 (1%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXGX 392
R Y+G L R F +G + VDLK G FV F A AV G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGK 58
Query: 393 XYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGSWX 572
G R+ V EYR++V L SW
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 573 XLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
LKD+MR AG+V +A K GV+ F+ M A+ L
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKL 160
>BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 52.0 bits (119), Expect = 3e-06
Identities = 45/162 (27%), Positives = 57/162 (35%), Gaps = 2/162 (1%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXGX 392
R Y+G L R F +G + VDLK G FV F A AV G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGK 58
Query: 393 XYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGSWX 572
G R+ V EYR++V L SW
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 573 XLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
LKD+MR AG+V +A K GV+ F+ M A+ L
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKL 160
>BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 52.0 bits (119), Expect = 3e-06
Identities = 45/162 (27%), Positives = 57/162 (35%), Gaps = 2/162 (1%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXGX 392
R Y+G L R F +G + VDLK G FV F A AV G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGK 58
Query: 393 XYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGSWX 572
G R+ V EYR++V L SW
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 573 XLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
LKD+MR AG+V +A K GV+ F+ M A+ L
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKL 160
>AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 52.0 bits (119), Expect = 3e-06
Identities = 45/162 (27%), Positives = 57/162 (35%), Gaps = 2/162 (1%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXGX 392
R Y+G L R F +G + VDLK G FV F A AV G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGK 58
Query: 393 XYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGSWX 572
G R+ V EYR++V L SW
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 573 XLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
LKD+MR AG+V +A K GV+ F+ M A+ L
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKL 160
>AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor,
arginine/serine-rich 4 protein.
Length = 494
Score = 52.0 bits (119), Expect = 3e-06
Identities = 45/162 (27%), Positives = 57/162 (35%), Gaps = 2/162 (1%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXGX 392
R Y+G L R F +G + VDLK G FV F A AV G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGK 58
Query: 393 XYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGSWX 572
G R+ V EYR++V L SW
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 573 XLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
LKD+MR AG+V +A K GV+ F+ M A+ L
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKL 160
>AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 382
Score = 52.0 bits (119), Expect = 3e-06
Identities = 45/162 (27%), Positives = 57/162 (35%), Gaps = 2/162 (1%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXGX 392
R Y+G L R F +G + VDLK G FV F A AV G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGK 58
Query: 393 XYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGSWX 572
G R+ V EYR++V L SW
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 573 XLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
LKD+MR AG+V +A K GV+ F+ M A+ L
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKL 160
>AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein.
Length = 192
Score = 52.0 bits (119), Expect = 3e-06
Identities = 45/162 (27%), Positives = 57/162 (35%), Gaps = 2/162 (1%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXGX 392
R Y+G L R F +G + VDLK G FV F A AV G
Sbjct: 3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG----FVEFDDLRDADDAVYELNGK 58
Query: 393 XYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYRVLVTGLPXSGSWX 572
G R+ V EYR++V L SW
Sbjct: 59 DLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQ 118
Query: 573 XLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
LKD+MR AG+V +A K GV+ F+ M A+ L
Sbjct: 119 DLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKL 160
>U30826-1|AAA93070.1| 272|Homo sapiens SRp40-1 protein.
Length = 272
Score = 50.0 bits (114), Expect = 1e-05
Identities = 44/165 (26%), Positives = 56/165 (33%), Gaps = 4/165 (2%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXG 389
CR ++G L P R F +G + +DLK F FV F P A AV G
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG----FGFVEFEDPRDADDAVYELDG 59
Query: 390 XXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EYRVLVTGLPXSG 563
R+ + E R++V L
Sbjct: 60 KELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRV 119
Query: 564 SWXXLKDHMRXAGDVCFAXXF--KXGSGVVXFLXXXXMXXAVXXL 692
SW LKD MR AG+V FA K GVV F + A+ L
Sbjct: 120 SWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 164
>BT007089-1|AAP35752.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 50.0 bits (114), Expect = 1e-05
Identities = 44/165 (26%), Positives = 56/165 (33%), Gaps = 4/165 (2%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXG 389
CR ++G L P R F +G + +DLK F FV F P A AV G
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG----FGFVEFEDPRDADDAVYELDG 59
Query: 390 XXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EYRVLVTGLPXSG 563
R+ + E R++V L
Sbjct: 60 KELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRV 119
Query: 564 SWXXLKDHMRXAGDVCFAXXF--KXGSGVVXFLXXXXMXXAVXXL 692
SW LKD MR AG+V FA K GVV F + A+ L
Sbjct: 120 SWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 164
>BC040209-1|AAH40209.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 50.0 bits (114), Expect = 1e-05
Identities = 44/165 (26%), Positives = 56/165 (33%), Gaps = 4/165 (2%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXG 389
CR ++G L P R F +G + +DLK F FV F P A AV G
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG----FGFVEFEDPRDADDAVYELDG 59
Query: 390 XXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EYRVLVTGLPXSG 563
R+ + E R++V L
Sbjct: 60 KELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRV 119
Query: 564 SWXXLKDHMRXAGDVCFAXXF--KXGSGVVXFLXXXXMXXAVXXL 692
SW LKD MR AG+V FA K GVV F + A+ L
Sbjct: 120 SWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 164
>BC018823-1|AAH18823.1| 272|Homo sapiens splicing factor,
arginine/serine-rich 5 protein.
Length = 272
Score = 50.0 bits (114), Expect = 1e-05
Identities = 44/165 (26%), Positives = 56/165 (33%), Gaps = 4/165 (2%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXG 389
CR ++G L P R F +G + +DLK F FV F P A AV G
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG----FGFVEFEDPRDADDAVYELDG 59
Query: 390 XXYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EYRVLVTGLPXSG 563
R+ + E R++V L
Sbjct: 60 KELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRV 119
Query: 564 SWXXLKDHMRXAGDVCFAXXF--KXGSGVVXFLXXXXMXXAVXXL 692
SW LKD MR AG+V FA K GVV F + A+ L
Sbjct: 120 SWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKL 164
>AB209856-1|BAD93093.1| 419|Homo sapiens splicing factor,
arginine/serine-rich 4 variant protein.
Length = 419
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 525 EYRVLVTGLPXSGSWXXLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
EYR++V L SW LKD+MR AG+V +A K GV+ F+ M A+ L
Sbjct: 28 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKL 85
>BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 41.1 bits (92), Expect = 0.005
Identities = 45/168 (26%), Positives = 55/168 (32%), Gaps = 8/168 (4%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXGX 392
R Y+G L R F +G + VDLK G FV F A AV G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYG----FVEFEDSRDADDAVYELNGK 58
Query: 393 XYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------EYRVLVTGLP 554
G R+ V EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 555 XSGSWXXLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
SW LKD MR AG+V +A K GV+ F M A+ L
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKL 166
>AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor,
arginine/serine-rich 6 protein.
Length = 344
Score = 41.1 bits (92), Expect = 0.005
Identities = 45/168 (26%), Positives = 55/168 (32%), Gaps = 8/168 (4%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXGX 392
R Y+G L R F +G + VDLK G FV F A AV G
Sbjct: 3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYG----FVEFEDSRDADDAVYELNGK 58
Query: 393 XYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------EYRVLVTGLP 554
G R+ V EYR++V L
Sbjct: 59 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 118
Query: 555 XSGSWXXLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
SW LKD MR AG+V +A K GV+ F M A+ L
Sbjct: 119 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKL 166
>AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich
splicing factor 6 variant protein.
Length = 279
Score = 41.1 bits (92), Expect = 0.005
Identities = 45/168 (26%), Positives = 55/168 (32%), Gaps = 8/168 (4%)
Frame = +3
Query: 213 RXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXGX 392
R Y+G L R F +G + VDLK G FV F A AV G
Sbjct: 37 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYG----FVEFEDSRDADDAVYELNGK 92
Query: 393 XYXGXRLRVXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------EYRVLVTGLP 554
G R+ V EYR++V L
Sbjct: 93 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS 152
Query: 555 XSGSWXXLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
SW LKD MR AG+V +A K GV+ F M A+ L
Sbjct: 153 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKL 200
>U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein.
Length = 344
Score = 39.9 bits (89), Expect = 0.012
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 525 EYRVLVTGLPXSGSWXXLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
EYR++V L SW LKD MR AG+V +A K GV+ F M A+ L
Sbjct: 109 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKL 166
>U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein.
Length = 335
Score = 39.9 bits (89), Expect = 0.012
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 525 EYRVLVTGLPXSGSWXXLKDHMRXAGDVCFAXXFK--XGSGVVXFLXXXXMXXAVXXL 692
EYR++V L SW LKD MR AG+V +A K GV+ F M A+ L
Sbjct: 109 EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKL 166
>U30884-1|AAA93074.1| 107|Homo sapiens SRp40-2 protein.
Length = 107
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXG 389
CR ++G L P R F +G + +DLK F FV F P A AV G
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG----FGFVEFEDPRDADDAVYELDG 59
Query: 390 XXYXGXRLRV 419
R+ +
Sbjct: 60 KELCSERVTI 69
>U30827-1|AAB60405.1| 107|Homo sapiens SRp40-3 protein.
Length = 107
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXG 389
CR ++G L P R F +G + +DLK F FV F P A AV G
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG----FGFVEFEDPRDADDAVYELDG 59
Query: 390 XXYXGXRLRV 419
R+ +
Sbjct: 60 KELCSERVTI 69
>CR542182-1|CAG46979.1| 107|Homo sapiens SFRS5 protein.
Length = 107
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXG 389
CR ++G L P R F +G + +DLK F FV F P A AV G
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG----FGFVEFEDPRDADDAVYELDG 59
Query: 390 XXYXGXRLRV 419
R+ +
Sbjct: 60 KELCSERVTI 69
>CR542167-1|CAG46964.1| 107|Homo sapiens SFRS5 protein.
Length = 107
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXG 389
CR ++G L P R F +G + +DLK F FV F P A AV G
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG----FGFVEFEDPRDADDAVYELDG 59
Query: 390 XXYXGXRLRV 419
R+ +
Sbjct: 60 KELCSERVTI 69
>BX640605-1|CAE45711.1| 107|Homo sapiens hypothetical protein
protein.
Length = 107
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXG 389
CR ++G L P R F +G + +DLK F FV F P A AV G
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG----FGFVEFEDPRDADDAVYELDG 59
Query: 390 XXYXGXRLRV 419
R+ +
Sbjct: 60 KELCSERVTI 69
>BC095420-1|AAH95420.1| 107|Homo sapiens SFRS5 protein protein.
Length = 107
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXG 389
CR ++G L P R F +G + +DLK F FV F P A AV G
Sbjct: 4 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG----FGFVEFEDPRDADDAVYELDG 59
Query: 390 XXYXGXRLRV 419
R+ +
Sbjct: 60 KELCSERVTI 69
>AB209804-1|BAD93041.1| 326|Homo sapiens CS0DF038YO05 variant
protein.
Length = 326
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVXFVDLKXXXGPPFAFVXFXXPXXAXXAVXAXXG 389
CR ++G L P R F +G + +DLK F FV F P A AV G
Sbjct: 7 CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRG----FGFVEFEDPRDADDAVYELDG 62
Query: 390 XXYXGXRLRV 419
R+ +
Sbjct: 63 KELCSERVTI 72
>U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein.
Length = 358
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVX----FVDLKXXXGPPFAFVXFXXPXXAXXAVX 377
C ++ LP +F FG V FVD F FV F P A A+
Sbjct: 273 CNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQ 332
Query: 378 AXXGXXYXGXRLRV 419
A G RL+V
Sbjct: 333 AMNGFQIGMKRLKV 346
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVX----FVDLKXXXGPPFAFVXFXXPXXAXXAVX 377
C ++ LP +F FG V FVD F FV F P A A+
Sbjct: 380 CNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQ 439
Query: 378 AXXGXXYXGXRLRV 419
A G RL+V
Sbjct: 440 AMNGFQIGMKRLKV 453
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVX----FVDLKXXXGPPFAFVXFXXPXXAXXAVX 377
C ++ LP +F FG V FVD F FV F P A A+
Sbjct: 322 CNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQ 381
Query: 378 AXXGXXYXGXRLRV 419
A G RL+V
Sbjct: 382 AMNGFQIGMKRLKV 395
>BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 464
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVX----FVDLKXXXGPPFAFVXFXXPXXAXXAVX 377
C ++ LP +F FG V FVD F FV F P A A+
Sbjct: 379 CNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQ 438
Query: 378 AXXGXXYXGXRLRV 419
A G RL+V
Sbjct: 439 AMNGFQIGMKRLKV 452
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVX----FVDLKXXXGPPFAFVXFXXPXXAXXAVX 377
C ++ LP +F FG V FVD F FV F P A A+
Sbjct: 380 CNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQ 439
Query: 378 AXXGXXYXGXRLRV 419
A G RL+V
Sbjct: 440 AMNGFQIGMKRLKV 453
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVX----FVDLKXXXGPPFAFVXFXXPXXAXXAVX 377
C ++ LP +F FG V FVD F FV F P A A+
Sbjct: 380 CNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQ 439
Query: 378 AXXGXXYXGXRLRV 419
A G RL+V
Sbjct: 440 AMNGFQIGMKRLKV 453
>AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 415
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVX----FVDLKXXXGPPFAFVXFXXPXXAXXAVX 377
C ++ LP +F FG V FVD F FV F P A A+
Sbjct: 330 CNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQ 389
Query: 378 AXXGXXYXGXRLRV 419
A G RL+V
Sbjct: 390 AMNGFQIGMKRLKV 403
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVX----FVDLKXXXGPPFAFVXFXXPXXAXXAVX 377
C ++ LP +F FG V FVD F FV F P A A+
Sbjct: 380 CNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQ 439
Query: 378 AXXGXXYXGXRLRV 419
A G RL+V
Sbjct: 440 AMNGFQIGMKRLKV 453
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVX----FVDLKXXXGPPFAFVXFXXPXXAXXAVX 377
C ++ LP +F FG V FVD F FV F P A A+
Sbjct: 377 CNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQ 436
Query: 378 AXXGXXYXGXRLRV 419
A G RL+V
Sbjct: 437 AMNGFQIGMKRLKV 450
>AF284423-1|AAG14457.1| 140|Homo sapiens RNA-binding protein
BRUNOL1 protein.
Length = 140
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVX----FVDLKXXXGPPFAFVXFXXPXXAXXAVX 377
C ++ LP +F FG V FVD F FV F P A A+
Sbjct: 55 CNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQ 114
Query: 378 AXXGXXYXGXRLRV 419
A G RL+V
Sbjct: 115 AMNGFQIGMKRLKV 128
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 31.1 bits (67), Expect = 5.4
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = +3
Query: 210 CRXYVGXLPPXXRXXXXXXLFYXFGXVX----FVDLKXXXGPPFAFVXFXXPXXAXXAVX 377
C ++ LP +F FG V FVD F FV F P A A+
Sbjct: 356 CNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQ 415
Query: 378 AXXGXXYXGXRLRV 419
A G RL+V
Sbjct: 416 AMNGFQIGMKRLKV 429
>AF048730-1|AAC39664.1| 726|Homo sapiens cyclin T1 protein.
Length = 726
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 486 HPNGHHRLENHESXHXHXHEGTRLEDGTXHXR 391
HP+ HH NH H H H ++L GT + R
Sbjct: 513 HPSNHHHHHNH---HSHKHSHSQLPVGTGNKR 541
>AF045161-1|AAC39638.1| 726|Homo sapiens cyclin T protein.
Length = 726
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 486 HPNGHHRLENHESXHXHXHEGTRLEDGTXHXR 391
HP+ HH NH H H H ++L GT + R
Sbjct: 513 HPSNHHHHHNH---HSHKHSHSQLPVGTGNKR 541
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,655,519
Number of Sequences: 237096
Number of extensions: 450974
Number of successful extensions: 1074
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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