Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_D13
(863 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 326 3e-90
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 325 4e-90
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 325 4e-90
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 165 9e-42
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 158 1e-39
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 97 3e-21
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 50 6e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 44 3e-05
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 41 2e-04
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 36 0.007
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.023
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.37
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.49
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.64
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 2.0
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 2.0
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.6
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 2.6
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 326 bits (800), Expect = 3e-90
Identities = 156/227 (68%), Positives = 178/227 (78%)
Frame = +1
Query: 139 HLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXMGKGSFKXAWVLDKLKAERE 318
++VVIG V L KCGG KRT E+FE+EA +GKGSFK AWVLDKLKAERE
Sbjct: 9 NVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERE 68
Query: 319 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 498
RGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGIS 128
Query: 499 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSYIKKIGYNPAAV 678
K+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE ++IKK+G+NP V
Sbjct: 129 KDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTV 186
Query: 679 AFVPISGWXGDXMLEPXTKMPWXKGWXVERKEGXXXGKXLIEXLDXI 819
FVP+SG+ GD M+EP T MPW +GW E K G GK L+E +D I
Sbjct: 187 PFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSI 233
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 325 bits (799), Expect = 4e-90
Identities = 155/227 (68%), Positives = 178/227 (78%)
Frame = +1
Query: 139 HLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXMGKGSFKXAWVLDKLKAERE 318
++VVIG V L KCGG KRT E+FE+EA +GKGSFK AWVLDKLKAERE
Sbjct: 9 NVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERE 68
Query: 319 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 498
RGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGIS 128
Query: 499 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSYIKKIGYNPAAV 678
K+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE ++IKK+G+NP V
Sbjct: 129 KDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTV 186
Query: 679 AFVPISGWXGDXMLEPXTKMPWXKGWXVERKEGXXXGKXLIEXLDXI 819
FVP+SG+ GD M+EP T MPW +GW E K G GK L+E +D I
Sbjct: 187 PFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSI 233
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 325 bits (799), Expect = 4e-90
Identities = 155/227 (68%), Positives = 178/227 (78%)
Frame = +1
Query: 139 HLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXMGKGSFKXAWVLDKLKAERE 318
++VVIG V L KCGG KRT E+FE+EA +GKGSFK AWVLDKLKAERE
Sbjct: 9 NVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERE 68
Query: 319 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 498
RGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGIS 128
Query: 499 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSYIKKIGYNPAAV 678
K+GQTREHALLA+TLGVKQLIV VNKMD+T +S+ RFEEI KE ++IKK+G+NP V
Sbjct: 129 KDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTV 186
Query: 679 AFVPISGWXGDXMLEPXTKMPWXKGWXVERKEGXXXGKXLIEXLDXI 819
FVP+SG+ GD M+EP T MPW +GW E K G GK L+E +D I
Sbjct: 187 PFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSI 233
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 165 bits (400), Expect = 9e-42
Identities = 89/208 (42%), Positives = 118/208 (56%), Gaps = 3/208 (1%)
Frame = +1
Query: 139 HLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXMGKGSFKXAWVLDKLKAERE 318
HLVV G V + + G R+ ++ EA GKGSF AW+LD + ER
Sbjct: 179 HLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERA 238
Query: 319 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 498
RG+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G
Sbjct: 239 RGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFL 298
Query: 499 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSY-IKKIGYNPAA 675
+NGQTREHA L LG+ +++V VNK+D +SE RF+EIK V + IK +G+ +
Sbjct: 299 ENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSN 356
Query: 676 VAFVPISGWXGDXMLEPXTK--MPWXKG 753
V FVPIS G +++ + W KG
Sbjct: 357 VHFVPISAISGTNLIQKDSSDLYKWYKG 384
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 158 bits (383), Expect = 1e-39
Identities = 79/209 (37%), Positives = 123/209 (58%), Gaps = 4/209 (1%)
Frame = +1
Query: 139 HLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXMGKGSFKXAWVLDKLKAERE 318
++V IG V + G KRT E+ E+EA+ GK S+ +W LD ERE
Sbjct: 240 NIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEERE 299
Query: 319 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 498
+G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG
Sbjct: 300 KGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFE 359
Query: 499 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSYIKKI-GYNPAA 675
+ GQTREHA+LA T G+ L+V +NKMD +SE R++E ++ +++++ GYN
Sbjct: 360 RGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKT 419
Query: 676 -VAFVPISGWXGDXMLE--PXTKMPWXKG 753
V ++P+S + G + + + PW +G
Sbjct: 420 DVKYMPVSAYTGQNVKDRVDSSVCPWYQG 448
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 97.1 bits (231), Expect = 3e-21
Identities = 52/129 (40%), Positives = 77/129 (59%)
Frame = +1
Query: 259 MGKGSFKXAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 438
+G+ SF +DK E+ RGITI A ++ET+ + +D PGH D+IKNMITG +
Sbjct: 80 LGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAAT 139
Query: 439 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFE 618
D A+++V+A G+ QTREH LLA +GVKQ++V +NK+D EP E
Sbjct: 140 MDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVEM 192
Query: 619 EIKKEVXSY 645
E+++ + Y
Sbjct: 193 EMRELLSEY 201
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 49.6 bits (113), Expect = 6e-07
Identities = 36/98 (36%), Positives = 50/98 (51%)
Frame = +1
Query: 289 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 468
V+D L AER+RGITI+ A F + +ID PGH DF + + D AV I+
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-- 124
Query: 469 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 582
+ AG+ QT+ A G+ ++I VNKMD
Sbjct: 125 ---DGSAGV--EAQTKVVWKQATKRGIPKVIF-VNKMD 156
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 44.0 bits (99), Expect = 3e-05
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +1
Query: 292 LDKLKAERERGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 459
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 460 VAAGTG 477
V A G
Sbjct: 155 VDASQG 160
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/87 (26%), Positives = 40/87 (45%)
Frame = +1
Query: 370 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 549
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 550 KQLIVGVNKMDSTEPXYSEPRFEEIKK 630
K +I+ NK+D +E ++ I K
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSILK 189
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 35.9 bits (79), Expect = 0.007
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +1
Query: 262 GKGSFKXAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 435
GK + A+ + + GIT I + F+ ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 436 QADCAVLIVAAGTG 477
AD VL+VA G
Sbjct: 243 IADIVVLVVAGDDG 256
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.3 bits (75), Expect = 0.023
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Frame = +1
Query: 292 LDKLKAERERGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDFIK 414
+D ++ ERE+GITI A W+ FE S Y + IID PGH DF
Sbjct: 102 MDFMELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTI 160
Query: 415 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 522
+ D AVL++ A +G I+ + Q R +
Sbjct: 161 EVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.37
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 367 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 477
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.49
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 295 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 417
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.64
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 379 IIDAPGHRDFIKNMITGTSQADCAVLIV 462
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 367 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 462
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 367 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 462
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 310 ERERGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 462
ERER ++I +A+ + + ID PGH DF+ + + +D VL+V
Sbjct: 185 ERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 356 SNFQRAISIVIPRSRSAFSLSNTQAXLKEPLPIXWASCSNCSXV 225
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,532,566
Number of Sequences: 5004
Number of extensions: 42759
Number of successful extensions: 123
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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