Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_D13
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 353 1e-97
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 353 1e-97
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 176 2e-75
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 235 4e-62
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 186 2e-47
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 186 2e-47
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 169 3e-42
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 88 7e-18
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 88 7e-18
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 81 8e-16
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 81 8e-16
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 81 8e-16
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 69 3e-12
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 45 8e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.012
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.20
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.20
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 33 0.26
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.35
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.35
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.9
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 9.9
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 353 bits (867), Expect = 1e-97
Identities = 171/227 (75%), Positives = 183/227 (80%)
Frame = +1
Query: 139 HLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXMGKGSFKXAWVLDKLKAERE 318
++VVIG V L KCGG KRT E+FE+EAQ MGKGSFK AWVLDKLKAERE
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 319 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 498
RGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS 128
Query: 499 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSYIKKIGYNPAAV 678
KNGQTREHALLA TLGVKQLIV NKMDSTEP +SE RF EI EV +IKKIGYNP AV
Sbjct: 129 KNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAV 188
Query: 679 AFVPISGWXGDXMLEPXTKMPWXKGWXVERKEGXXXGKXLIEXLDXI 819
FVPISG+ GD MLE + MPW KGW VERKEG GK L+E LD I
Sbjct: 189 PFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSI 235
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 353 bits (867), Expect = 1e-97
Identities = 171/227 (75%), Positives = 183/227 (80%)
Frame = +1
Query: 139 HLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXMGKGSFKXAWVLDKLKAERE 318
++VVIG V L KCGG KRT E+FE+EAQ MGKGSFK AWVLDKLKAERE
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 319 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 498
RGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS 128
Query: 499 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSYIKKIGYNPAAV 678
KNGQTREHALLA TLGVKQLIV NKMDSTEP +SE RF EI EV +IKKIGYNP AV
Sbjct: 129 KNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAV 188
Query: 679 AFVPISGWXGDXMLEPXTKMPWXKGWXVERKEGXXXGKXLIEXLDXI 819
FVPISG+ GD MLE + MPW KGW VERKEG GK L+E LD I
Sbjct: 189 PFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSI 235
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 176 bits (429), Expect(2) = 2e-75
Identities = 84/109 (77%), Positives = 91/109 (83%)
Frame = +1
Query: 139 HLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXMGKGSFKXAWVLDKLKAERE 318
++VVIG V L KCGG KRT E+FE+EAQ MGKGSFK AWVLDKLKAERE
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 319 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 465
RGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 124 bits (299), Expect(2) = 2e-75
Identities = 58/88 (65%), Positives = 64/88 (72%)
Frame = +1
Query: 556 LIVGVNKMDSTEPXYSEPRFEEIKKEVXSYIKKIGYNPAAVAFVPISGWXGDXMLEPXTK 735
L+V NKMDSTEP +SE RF EI EV +IKKIGYNP AV FVPISG+ GD MLE +
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 736 MPWXKGWXVERKEGXXXGKXLIEXLDXI 819
MPW KGW VERKEG GK L+E LD I
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSI 201
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 235 bits (574), Expect = 4e-62
Identities = 113/141 (80%), Positives = 121/141 (85%)
Frame = +1
Query: 139 HLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXMGKGSFKXAWVLDKLKAERE 318
++VVIG V L KCGG KRT E+FE+EAQ MGKGSFK AWVLDKLKAERE
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 319 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 498
RGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGIS
Sbjct: 69 RGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGIS 128
Query: 499 KNGQTREHALLAFTLGVKQLI 561
KNGQTREHALLA TLGVKQL+
Sbjct: 129 KNGQTREHALLAQTLGVKQLV 149
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 698 DGTETTCWSLXPKCLGXRDGRWSVRKXKXXENXS 799
D TETTC C G RDG + RK E S
Sbjct: 178 DSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 186 bits (453), Expect = 2e-47
Identities = 99/225 (44%), Positives = 139/225 (61%), Gaps = 1/225 (0%)
Frame = +1
Query: 82 PAVCXPCPXPXWAXPXLPFHLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXM 261
P+V P P A L +L+V+G V L RT ++F+ EA
Sbjct: 154 PSVARKTPKPRVADKDL-INLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARN 212
Query: 262 GKGSFKXAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 441
GK SF AWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQA
Sbjct: 213 GKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQA 272
Query: 442 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFEE 621
D A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+E
Sbjct: 273 DAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDE 330
Query: 622 IKKEVXSYI-KKIGYNPAAVAFVPISGWXGDXMLEPXTKMPWXKG 753
IK + ++ ++ G++ FVP+SG+ G+ +++ ++ W G
Sbjct: 331 IKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWYDG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 186 bits (453), Expect = 2e-47
Identities = 99/225 (44%), Positives = 139/225 (61%), Gaps = 1/225 (0%)
Frame = +1
Query: 82 PAVCXPCPXPXWAXPXLPFHLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXM 261
P+V P P A L +L+V+G V L RT ++F+ EA
Sbjct: 172 PSVARKTPKPRVADKDL-INLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARN 230
Query: 262 GKGSFKXAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 441
GK SF AWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQA
Sbjct: 231 GKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQA 290
Query: 442 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFEE 621
D A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+E
Sbjct: 291 DAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDE 348
Query: 622 IKKEVXSYI-KKIGYNPAAVAFVPISGWXGDXMLEPXTKMPWXKG 753
IK + ++ ++ G++ FVP+SG+ G+ +++ ++ W G
Sbjct: 349 IKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWYDG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 169 bits (410), Expect = 3e-42
Identities = 80/191 (41%), Positives = 120/191 (62%), Gaps = 1/191 (0%)
Frame = +1
Query: 139 HLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXMGKGSFKXAWVLDKLKAERE 318
++V +G V L G KRT E++E+EA+ G+ S+ +W +D ERE
Sbjct: 111 NMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEERE 170
Query: 319 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 498
+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G
Sbjct: 171 KGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFD 230
Query: 499 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSYIKKIGYNPAA- 675
+ GQTREH++L T GVK L++ VNKMD + E RF+EI+ ++ +++K+G+NP
Sbjct: 231 RGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTD 290
Query: 676 VAFVPISGWXG 708
+ +VP SG G
Sbjct: 291 ITYVPCSGLTG 301
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 88.2 bits (209), Expect = 7e-18
Identities = 52/132 (39%), Positives = 74/132 (56%)
Frame = +1
Query: 292 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 471
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 472 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSYIK 651
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 652 KIGYNPAAVAFV 687
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 88.2 bits (209), Expect = 7e-18
Identities = 52/132 (39%), Positives = 74/132 (56%)
Frame = +1
Query: 292 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 471
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 472 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSYIK 651
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 652 KIGYNPAAVAFV 687
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 81.4 bits (192), Expect = 8e-16
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Frame = +1
Query: 292 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 471
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 472 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSY 645
G QTREH LLA +GV ++V +NK+D E +E R E ++ ++
Sbjct: 147 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 196
Query: 646 IKKIGY 663
+ + GY
Sbjct: 197 LNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 81.4 bits (192), Expect = 8e-16
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Frame = +1
Query: 292 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 471
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 472 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSY 645
G QTREH LLA +GV ++V +NK+D E +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 646 IKKIGY 663
+ + GY
Sbjct: 198 LNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 81.4 bits (192), Expect = 8e-16
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Frame = +1
Query: 292 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 471
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 472 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPXYSEPRFEEIKKEVXSY 645
G QTREH LLA +GV ++V +NK+D E +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 646 IKKIGY 663
+ + GY
Sbjct: 198 LNEFGY 203
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = +1
Query: 139 HLVVIGPVAXXXXXXXXXLXSKCGGXXKRTXEQFEQEAQXMGKGSFKXAWVLDKLKAER 315
++VVIG V L KCGG KRT E+FE+EAQ MGKGSFK AWVLDKLK +
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/98 (35%), Positives = 49/98 (50%)
Frame = +1
Query: 289 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 468
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 469 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 582
G QT + LAF + Q+I +NK+D
Sbjct: 136 NQG-------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.8 bits (101), Expect = 8e-05
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 262 GKGSFKXAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 438
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 439 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 582
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 373 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 552
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 553 QLIVGVNKMDSTEPXYSEPRFEEIKKEVXSYIKKIGY--NPAAVAFVPISGWXGDXMLE 723
++I+ +NK D E + + E K+V +K +G N V G+ + ML+
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQ 181
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 40.3 bits (90), Expect = 0.002
Identities = 32/97 (32%), Positives = 43/97 (44%)
Frame = +1
Query: 292 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 471
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 472 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 582
G G+ T L + + I VNKMD
Sbjct: 146 VG----GVQSQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 289 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 468
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 469 GTG 477
G
Sbjct: 124 SAG 126
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 370 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 549
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 550 KQLIVGVNKMDSTEPXYSEPRFEEI 624
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 292 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 462
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 292 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 462
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 575 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 447
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 33.1 bits (72), Expect = 0.26
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 379 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 558
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 559 IVGVNKMDSTEPXYSEPR 612
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 295 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 459
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 460 VAAGTG 477
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 295 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 459
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 460 VAAGTG 477
V A G
Sbjct: 107 VDAHEG 112
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 328 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 477
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 328 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 477
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 373 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 468
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,318,164
Number of Sequences: 27780
Number of extensions: 249377
Number of successful extensions: 583
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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