Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_D05
(837 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 182 2e-46
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.036
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.047
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.047
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.047
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.047
U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 9.5
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 9.5
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 9.5
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 9.5
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 182 bits (444), Expect = 2e-46
Identities = 82/126 (65%), Positives = 102/126 (80%)
Frame = +3
Query: 108 SGGLXVLALNEEXVTKMLAATTHLGAENVNFQMEXYVYKRRADGTHVINLRRTWEKLVLA 287
SGG AL EE V K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+LA
Sbjct: 2 SGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLA 61
Query: 288 ARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRL 467
ARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPRL
Sbjct: 62 ARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRL 121
Query: 468 LIVLDP 485
L++ DP
Sbjct: 122 LVISDP 127
Score = 64.5 bits (150), Expect = 9e-11
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = +2
Query: 536 VIALCNTDSPLRFVDIAIPXHTKSSHSIGLMWWLLAREVLRLRG 667
VI+ NT+SPL+ +DI +P + K SIGLMWW+LARE+L LRG
Sbjct: 144 VISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRG 187
Score = 35.9 bits (79), Expect = 0.036
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Frame = +1
Query: 493 DHQPITEASYVNIPGDCFVQHRLPTKICG---HCYPMXHQVFPLYWF----DVVVV-GT* 648
DHQ +TEASYV +P FV P K+ C + L W+ +++++ G
Sbjct: 130 DHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKI 189
Query: 649 SAEASWCASXDXRWXVVVXLFFYRDPXKVKR 741
S + + ++ L+FYRDP + ++
Sbjct: 190 SRQTGFVLEGK---EIMPDLYFYRDPTETEK 217
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 284 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 406
GC CC + C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 284 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 406
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 284 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 406
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 284 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 406
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 284 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 406
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical
protein C27F2.1 protein.
Length = 673
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 500 NPLLKLHMSTFLVIALCNTDSPLRF 574
+P+LK H ++F V A C+ +PLRF
Sbjct: 472 HPVLKRHSTSFAVSAFCHVTNPLRF 496
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +2
Query: 281 SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRCFY*PDPSC 448
S SCC S C+ + +S+C T +C+ +C C T PSC
Sbjct: 38 SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGPSC 92
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +2
Query: 164 CNHPSWGRKC*LPDGXLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLI 340
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 341 TALRSACCTEV-CRAHRCYAYCGT 409
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 599 TKSSHSIGLMWWLLA 643
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +2
Query: 164 CNHPSWGRKC*LPDGXLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLI 340
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 341 TALRSACCTEV-CRAHRCYAYCGT 409
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +2
Query: 164 CNHPSWGRKC*LPDGXLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLI 340
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 341 TALRSACCTEV-CRAHRCYAYCGT 409
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,653,128
Number of Sequences: 27780
Number of extensions: 394770
Number of successful extensions: 935
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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