Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_D03
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 31 0.78
AF036699-6|AAB88357.1| 170|Caenorhabditis elegans Hypothetical ... 31 1.4
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 30 1.8
AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical ... 30 1.8
AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical ... 30 1.8
AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical ... 30 1.8
AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical ... 30 1.8
AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical ... 30 1.8
AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical ... 30 1.8
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 28 7.2
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 31.5 bits (68), Expect = 0.78
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +2
Query: 497 LQAAVQNTVQESQKLAKKVSSNVQETXEKLAPKIKAAYDDFAKNXQEVIXKIQEAAN 667
LQ A + VQ + K + SNV E + + I DD K ++ ++E +
Sbjct: 306 LQKAEEEVVQTIDQTVKNIKSNVNEVKKDVEKNIAEKVDDITKELEKSAKSLEETTD 362
>AF036699-6|AAB88357.1| 170|Caenorhabditis elegans Hypothetical
protein F58F6.3 protein.
Length = 170
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 457 GGPCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 347
GG GA A C A++ P PP+ S RA+P W
Sbjct: 96 GGEGGAKNNRAVCLAASRPPPPYLIYSGRRAMPSAEW 132
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 470 KNATALREKLQAAVQNTVQESQKLAKKVSSNVQETXEKLAPKIKAAYDDFAKNXQEVIXK 649
+N + +K VQ + QK+ KK + NVQ+ +K A K AKN Q++ K
Sbjct: 1265 ENVQKMCKKCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKC----AKNVQKMCKK 1320
>AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical
protein C04C3.5a protein.
Length = 331
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 497 LQAAVQNTVQESQKLAKK---VSSNVQETXEKLAPKIKAAYDDFAK 625
LQA VQN QE+++L+ K V+S+ E EK+ K K Y+ K
Sbjct: 110 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 154
>AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical
protein C04C3.5c protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 497 LQAAVQNTVQESQKLAKK---VSSNVQETXEKLAPKIKAAYDDFAK 625
LQA VQN QE+++L+ K V+S+ E EK+ K K Y+ K
Sbjct: 172 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 216
>AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical
protein C04C3.5b protein.
Length = 404
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 497 LQAAVQNTVQESQKLAKK---VSSNVQETXEKLAPKIKAAYDDFAK 625
LQA VQN QE+++L+ K V+S+ E EK+ K K Y+ K
Sbjct: 183 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 227
>AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical
protein protein.
Length = 331
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 497 LQAAVQNTVQESQKLAKK---VSSNVQETXEKLAPKIKAAYDDFAK 625
LQA VQN QE+++L+ K V+S+ E EK+ K K Y+ K
Sbjct: 110 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 154
>AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical
protein protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 497 LQAAVQNTVQESQKLAKK---VSSNVQETXEKLAPKIKAAYDDFAK 625
LQA VQN QE+++L+ K V+S+ E EK+ K K Y+ K
Sbjct: 172 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 216
>AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical
protein protein.
Length = 404
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 497 LQAAVQNTVQESQKLAKK---VSSNVQETXEKLAPKIKAAYDDFAK 625
LQA VQN QE+++L+ K V+S+ E EK+ K K Y+ K
Sbjct: 183 LQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK-KREYEQLQK 227
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 457 GGPCGAPRPCARCSASTVPKPP 392
GG CG P PC + + V PP
Sbjct: 65 GGGCGGPAPCGGAAPAYVAPPP 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,787,933
Number of Sequences: 27780
Number of extensions: 139417
Number of successful extensions: 573
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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