Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_D02
         (873 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein pro...   170   6e-42
BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19 p...   170   6e-42
BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19 p...   170   6e-42
BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19 p...   170   6e-42
BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19 p...   170   6e-42
AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19 p...   170   6e-42
AB007155-1|BAA28593.1|   18|Homo sapiens ribosomal protein S19 p...    31   5.5  

>M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein
           protein.
          Length = 145

 Score =  170 bits (413), Expect = 6e-42
 Identities = 83/141 (58%), Positives = 101/141 (71%)
 Frame = +2

Query: 203 VTVXAVXXAXLVKTVAAXLKKTGKVKVPEHXDLVKXARFKXLAPYXPDWFYVRCAAILRH 382
           VTV  V     V+ +AA LKK+GK+KVPE  D VK A+ K LAPY  +WFY R A+  RH
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63

Query: 383 IYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 562
           +Y+R   GV ++TKI+GGR RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 64  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 123

Query: 563 TTQGRRDLDRIAAQVRLKAKQ 625
           T QG+RDLDRIA QV    K+
Sbjct: 124 TPQGQRDLDRIAGQVAAANKK 144


>BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  170 bits (413), Expect = 6e-42
 Identities = 83/141 (58%), Positives = 101/141 (71%)
 Frame = +2

Query: 203 VTVXAVXXAXLVKTVAAXLKKTGKVKVPEHXDLVKXARFKXLAPYXPDWFYVRCAAILRH 382
           VTV  V     V+ +AA LKK+GK+KVPE  D VK A+ K LAPY  +WFY R A+  RH
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63

Query: 383 IYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 562
           +Y+R   GV ++TKI+GGR RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 64  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 123

Query: 563 TTQGRRDLDRIAAQVRLKAKQ 625
           T QG+RDLDRIA QV    K+
Sbjct: 124 TPQGQRDLDRIAGQVAAANKK 144


>BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19
           protein.
          Length = 157

 Score =  170 bits (413), Expect = 6e-42
 Identities = 83/141 (58%), Positives = 101/141 (71%)
 Frame = +2

Query: 203 VTVXAVXXAXLVKTVAAXLKKTGKVKVPEHXDLVKXARFKXLAPYXPDWFYVRCAAILRH 382
           VTV  V     V+ +AA LKK+GK+KVPE  D VK A+ K LAPY  +WFY R A+  RH
Sbjct: 16  VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 75

Query: 383 IYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 562
           +Y+R   GV ++TKI+GGR RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 76  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 135

Query: 563 TTQGRRDLDRIAAQVRLKAKQ 625
           T QG+RDLDRIA QV    K+
Sbjct: 136 TPQGQRDLDRIAGQVAAANKK 156


>BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  170 bits (413), Expect = 6e-42
 Identities = 83/141 (58%), Positives = 101/141 (71%)
 Frame = +2

Query: 203 VTVXAVXXAXLVKTVAAXLKKTGKVKVPEHXDLVKXARFKXLAPYXPDWFYVRCAAILRH 382
           VTV  V     V+ +AA LKK+GK+KVPE  D VK A+ K LAPY  +WFY R A+  RH
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63

Query: 383 IYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 562
           +Y+R   GV ++TKI+GGR RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 64  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 123

Query: 563 TTQGRRDLDRIAAQVRLKAKQ 625
           T QG+RDLDRIA QV    K+
Sbjct: 124 TPQGQRDLDRIAGQVAAANKK 144


>BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  170 bits (413), Expect = 6e-42
 Identities = 83/141 (58%), Positives = 101/141 (71%)
 Frame = +2

Query: 203 VTVXAVXXAXLVKTVAAXLKKTGKVKVPEHXDLVKXARFKXLAPYXPDWFYVRCAAILRH 382
           VTV  V     V+ +AA LKK+GK+KVPE  D VK A+ K LAPY  +WFY R A+  RH
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63

Query: 383 IYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 562
           +Y+R   GV ++TKI+GGR RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 64  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 123

Query: 563 TTQGRRDLDRIAAQVRLKAKQ 625
           T QG+RDLDRIA QV    K+
Sbjct: 124 TPQGQRDLDRIAGQVAAANKK 144


>AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  170 bits (413), Expect = 6e-42
 Identities = 83/141 (58%), Positives = 101/141 (71%)
 Frame = +2

Query: 203 VTVXAVXXAXLVKTVAAXLKKTGKVKVPEHXDLVKXARFKXLAPYXPDWFYVRCAAILRH 382
           VTV  V     V+ +AA LKK+GK+KVPE  D VK A+ K LAPY  +WFY R A+  RH
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63

Query: 383 IYIRSPVGVKTVTKIFGGRXRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 562
           +Y+R   GV ++TKI+GGR RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 64  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 123

Query: 563 TTQGRRDLDRIAAQVRLKAKQ 625
           T QG+RDLDRIA QV    K+
Sbjct: 124 TPQGQRDLDRIAGQVAAANKK 144


>AB007155-1|BAA28593.1|   18|Homo sapiens ribosomal protein S19
           protein.
          Length = 18

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +2

Query: 551 GRILTTQGRRDLDRIAAQ 604
           GR LT QG+RDLDRIA Q
Sbjct: 1   GRKLTPQGQRDLDRIAGQ 18


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,751,459
Number of Sequences: 237096
Number of extensions: 1336717
Number of successful extensions: 2188
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2188
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)