Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_C24
(873 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 190 7e-48
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 190 7e-48
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 190 7e-48
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 190 7e-48
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 185 2e-46
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 111 4e-24
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 91 5e-18
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 34 0.58
BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear prote... 32 3.1
BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein. 32 3.1
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 5.5
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 5.5
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 5.5
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 31 7.2
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 31 7.2
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 31 7.2
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 31 7.2
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 190 bits (462), Expect = 7e-48
Identities = 86/101 (85%), Positives = 94/101 (93%)
Frame = +2
Query: 182 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 361
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 362 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPL 484
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPL
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
Score = 166 bits (403), Expect = 1e-40
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +1
Query: 520 PGEDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADXLINA 699
P EDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+AD LINA
Sbjct: 121 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
Query: 700 AKGSSNSYAIKKKDELERVAKSNR 771
AKGSSNSYAIKKKDELERVAKSNR
Sbjct: 181 AKGSSNSYAIKKKDELERVAKSNR 204
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 190 bits (462), Expect = 7e-48
Identities = 86/101 (85%), Positives = 94/101 (93%)
Frame = +2
Query: 182 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 361
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 362 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPL 484
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPL
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
Score = 166 bits (403), Expect = 1e-40
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +1
Query: 520 PGEDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADXLINA 699
P EDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+AD LINA
Sbjct: 121 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
Query: 700 AKGSSNSYAIKKKDELERVAKSNR 771
AKGSSNSYAIKKKDELERVAKSNR
Sbjct: 181 AKGSSNSYAIKKKDELERVAKSNR 204
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 190 bits (462), Expect = 7e-48
Identities = 86/101 (85%), Positives = 94/101 (93%)
Frame = +2
Query: 182 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 361
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 362 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPL 484
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPL
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
Score = 162 bits (394), Expect = 1e-39
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1
Query: 520 PGEDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADXLINA 699
P EDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+AD LINA
Sbjct: 121 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
Query: 700 AKGSSNSYAIKKKDELERVAKSNR 771
AKGSSN YAIKK+DELERVAKSNR
Sbjct: 181 AKGSSNFYAIKKRDELERVAKSNR 204
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 190 bits (462), Expect = 7e-48
Identities = 86/101 (85%), Positives = 94/101 (93%)
Frame = +2
Query: 182 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 361
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 362 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPL 484
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPL
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
Score = 166 bits (403), Expect = 1e-40
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +1
Query: 520 PGEDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADXLINA 699
P EDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+AD LINA
Sbjct: 121 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
Query: 700 AKGSSNSYAIKKKDELERVAKSNR 771
AKGSSNSYAIKKKDELERVAKSNR
Sbjct: 181 AKGSSNSYAIKKKDELERVAKSNR 204
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 185 bits (451), Expect = 2e-46
Identities = 84/101 (83%), Positives = 92/101 (91%)
Frame = +2
Query: 182 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 361
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA FRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 362 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPL 484
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPL
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPL 109
Score = 166 bits (403), Expect = 1e-40
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +1
Query: 520 PGEDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADXLINA 699
P EDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+AD LINA
Sbjct: 121 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINA 180
Query: 700 AKGSSNSYAIKKKDELERVAKSNR 771
AKGSSNSYAIKKKDELERVAKSNR
Sbjct: 181 AKGSSNSYAIKKKDELERVAKSNR 204
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 111 bits (266), Expect = 4e-24
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +1
Query: 607 AIWLLCTGAREAAFRNIKTIAECVADXLINAAKGSSNSYAIKKKDELERVAKSNR 771
AIWLLCTGAREAAFRNIKTIAEC+AD LINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 55
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 91.1 bits (216), Expect = 5e-18
Identities = 45/59 (76%), Positives = 46/59 (77%)
Frame = +2
Query: 347 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLASTRDCHYQLWTP 523
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L L TP
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRAGCALSTP 59
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 34.3 bits (75), Expect = 0.58
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 410 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 318
C C + ++ E G R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
>BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear protein
NHN1 protein.
Length = 953
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 475 KPSGKYS*LPLSTLDPGEDSTRIGRAGTVRRQAVDVSPLRRVNQAI 612
K S K + +P DPG ST+ G+A T+ R+ + L+ V AI
Sbjct: 897 KSSSKVTSVPGKASDPGAASTKSGKASTLSRREELLKQLKAVEDAI 942
>BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein.
Length = 718
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 475 KPSGKYS*LPLSTLDPGEDSTRIGRAGTVRRQAVDVSPLRRVNQAI 612
K S K + +P DPG ST+ G+A T+ R+ + L+ V AI
Sbjct: 662 KSSSKVTSVPGKASDPGAASTKSGKASTLSRREELLKQLKAVEDAI 707
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 5.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 410 CHCSDRASLESL*GAPRLGTGLYGNACVH 324
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 5.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 410 CHCSDRASLESL*GAPRLGTGLYGNACVH 324
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 5.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 410 CHCSDRASLESL*GAPRLGTGLYGNACVH 324
C C + ++ E G R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 263 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 406
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 1039 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1085
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 263 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 406
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 263 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 406
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 263 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 406
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,281,148
Number of Sequences: 237096
Number of extensions: 2298733
Number of successful extensions: 4089
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4089
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -