Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP17_F_C14
         (820 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27 pro...    68   4e-11
L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.     68   4e-11
BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27 (...    68   4e-11
BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27 (...    68   4e-11
AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27 ...    68   4e-11
AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27 p...    68   4e-11
BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-l...    67   6e-11
AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27 p...    67   6e-11
BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.       67   8e-11
AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27 ...    37   0.076

>U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score = 68.1 bits (159), Expect = 4e-11
 Identities = 34/70 (48%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +2

Query: 113 PPGGRRRXXXKLKRXXAHPNSYFMDVKCPGCYKITXVFSHXQKXVVWAGCSXXFVNHWGA 292
           P     +   K KR    PNSYFMDVKCPGCYKIT VFSH Q  V+  GCS       G 
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 69

Query: 293 -X*INXXCSF 319
              +   CSF
Sbjct: 70  KARLTEGCSF 79


>L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.
          Length = 84

 Score = 68.1 bits (159), Expect = 4e-11
 Identities = 34/70 (48%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +2

Query: 113 PPGGRRRXXXKLKRXXAHPNSYFMDVKCPGCYKITXVFSHXQKXVVWAGCSXXFVNHWGA 292
           P     +   K KR    PNSYFMDVKCPGCYKIT VFSH Q  V+  GCS       G 
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 69

Query: 293 -X*INXXCSF 319
              +   CSF
Sbjct: 70  KARLTEGCSF 79


>BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score = 68.1 bits (159), Expect = 4e-11
 Identities = 34/70 (48%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +2

Query: 113 PPGGRRRXXXKLKRXXAHPNSYFMDVKCPGCYKITXVFSHXQKXVVWAGCSXXFVNHWGA 292
           P     +   K KR    PNSYFMDVKCPGCYKIT VFSH Q  V+  GCS       G 
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 69

Query: 293 -X*INXXCSF 319
              +   CSF
Sbjct: 70  KARLTEGCSF 79


>BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score = 68.1 bits (159), Expect = 4e-11
 Identities = 34/70 (48%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +2

Query: 113 PPGGRRRXXXKLKRXXAHPNSYFMDVKCPGCYKITXVFSHXQKXVVWAGCSXXFVNHWGA 292
           P     +   K KR    PNSYFMDVKCPGCYKIT VFSH Q  V+  GCS       G 
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 69

Query: 293 -X*INXXCSF 319
              +   CSF
Sbjct: 70  KARLTEGCSF 79


>AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score = 68.1 bits (159), Expect = 4e-11
 Identities = 34/70 (48%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +2

Query: 113 PPGGRRRXXXKLKRXXAHPNSYFMDVKCPGCYKITXVFSHXQKXVVWAGCSXXFVNHWGA 292
           P     +   K KR    PNSYFMDVKCPGCYKIT VFSH Q  V+  GCS       G 
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 69

Query: 293 -X*INXXCSF 319
              +   CSF
Sbjct: 70  KARLTEGCSF 79


>AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score = 68.1 bits (159), Expect = 4e-11
 Identities = 34/70 (48%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +2

Query: 113 PPGGRRRXXXKLKRXXAHPNSYFMDVKCPGCYKITXVFSHXQKXVVWAGCSXXFVNHWGA 292
           P     +   K KR    PNSYFMDVKCPGCYKIT VFSH Q  V+  GCS       G 
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGG 69

Query: 293 -X*INXXCSF 319
              +   CSF
Sbjct: 70  KARLTEGCSF 79


>BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-like
           protein.
          Length = 84

 Score = 67.3 bits (157), Expect = 6e-11
 Identities = 33/60 (55%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +2

Query: 143 KLKRXXAHPNSYFMDVKCPGCYKITXVFSHXQKXVVWAGCSXXFVNHWGA-X*INXXCSF 319
           K KR    PNSYFMDVKCPGCYKIT VFSH Q  V+  GCS       G    +   CSF
Sbjct: 20  KEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSF 79


>AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27
           protein.
          Length = 69

 Score = 67.3 bits (157), Expect = 6e-11
 Identities = 30/51 (58%), Positives = 32/51 (62%)
 Frame = +2

Query: 113 PPGGRRRXXXKLKRXXAHPNSYFMDVKCPGCYKITXVFSHXQKXVVWAGCS 265
           P     +   K KR    PNSYFMDVKCPGCYKIT VFSH Q  V+  GCS
Sbjct: 5   PSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 55


>BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.
          Length = 113

 Score = 66.9 bits (156), Expect = 8e-11
 Identities = 29/41 (70%), Positives = 30/41 (73%)
 Frame = +2

Query: 143 KLKRXXAHPNSYFMDVKCPGCYKITXVFSHXQKXVVWAGCS 265
           K KR    PNSYFMDVKCPGCYKIT VFSH Q  V+  GCS
Sbjct: 36  KKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 76


>AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 66

 Score = 37.1 bits (82), Expect = 0.076
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = +2

Query: 113 PPGGRRRXXXKLKRXXAHPNSYFMDVKCPG 202
           P     +   K KR    PNSYFMDVKCPG
Sbjct: 10  PSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,439,712
Number of Sequences: 237096
Number of extensions: 956615
Number of successful extensions: 2303
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2213
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)