Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP17_F_C13
(983 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 35 0.015
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 33 0.082
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.11
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.11
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.44
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.76
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.8
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.1
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 27 4.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 7.1
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 7.1
SPBC1703.01c ||SPBP4H10.22c|RNase P and RNase MRP subunit|Schizo... 26 7.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 7.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 9.4
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 35.1 bits (77), Expect = 0.015
Identities = 25/79 (31%), Positives = 29/79 (36%)
Frame = -1
Query: 353 KXAXPRXGKXQKRGPR*XXSXAXXXXXXGGXXGGXGGXGRGGRXGXGXXXXARXGXGARX 174
K P+ K + GP GG GG GG RGG G +R G G
Sbjct: 120 KTVGPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGG-----GSRGGFGGGS 174
Query: 173 PXGXXGXXGQGGXRGXXXG 117
G G +GG RG G
Sbjct: 175 RGGSRGGF-RGGSRGGFRG 192
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 32.7 bits (71), Expect = 0.082
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +1
Query: 118 PXXXPLXPPWPXXPXXPXGXLAPXPXRAXXXXPXPXLPPRPXPPXPPXXP 267
P P+ P P P P +AP P +P P P PP P
Sbjct: 592 PPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAP 641
Score = 27.5 bits (58), Expect = 3.1
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = +1
Query: 103 SXPXXPXXXPLXPPWPXXPXXPXGXLAPXPXRAXXXXPXPXLPPRPXPPXPPXXP 267
S P P P+ P P P +AP P +P P P PP P
Sbjct: 558 SVPQRPAV-PVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAP 611
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.11
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 156 PAXPPXXPRPXPXXGPXPXPXPXPAPXPASPXXS 257
P P P P P P P PAP PA+P S
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVAS 490
Score = 29.9 bits (64), Expect = 0.58
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 156 PAXPPXXPRPXPXXGPXPXPXPXPAPXPASPXXSXXPP 269
P+ PP P P P P PA P P PP
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 118 PXXXPLXPPWPXXPXXPXGXLAPXPXRAXXXXPXPXLPPRPXPP 249
P PL P P P P G A P P P P P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 156 PAXPPXXPRPXPXXGPXPXPXPXPAPXPAS-PXXSXXPP 269
P+ PP P P P P P P PA P PP
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +1
Query: 109 PXXPXXXPLXPPWPXXPXXPXGXLAPXPXRAXXXXPXPXLPPRPXPPXPPXXPP 270
P P P PP P P +AP P A P P P PP P P
Sbjct: 437 PSLPMGAPAAPPLP-----PSAPIAP-PLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 139 PPWPXXPXXPXGXLAPXPXRAXXXXPXPXLPPRPXPPXPPXXPP 270
PP P P P P A P P PP P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 26.2 bits (55), Expect = 7.1
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 7/40 (17%)
Frame = +3
Query: 159 AXPPXXPRPXPXXGPXPXPXP-------XPAPXPASPXXS 257
A PP PR P G P P PAP PA P S
Sbjct: 360 APPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRS 399
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 130 PLXPPWPXXPXXPXGXLAPXPXRAXXXXPXPXLPPRPXPPXPPXXPP 270
P PP P P L P + P PP P PP PP
Sbjct: 388 PPAPP-PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.11
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 167 PXXPSPPXXXGPXPXXPXXPCPXARXPPXLPPPP 268
P P P GP P P A PP PPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 144 LAXXPAXPPXXPRPXPXXGPXPXPXPXPAPXPASPXXSXXPP 269
L P PP P P P P P P PAP P PP
Sbjct: 729 LKSPPPPPPAVIVPTP--APAPIPVPPPAPIMGGPPPPPPPP 768
Score = 30.7 bits (66), Expect = 0.33
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +3
Query: 132 PXXXLAXXPAXPPXX-PRPXPXXGPXPXPXPXPAPXPASPXXSXXPP 269
P + PA P P P P G P P P P A P PP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.76
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 182 PPXXXGPXPXXPXXPCPXARXPPXLPPPPXXXXXXPP 292
P P P P P P PP PPPP PP
Sbjct: 742 PTPAPAPIPVPP--PAPIMGGPPPPPPPPGVAGAGPP 776
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/44 (27%), Positives = 15/44 (34%)
Frame = +3
Query: 165 PPXXPRPXPXXGPXPXPXPXPAPXPASPXXSXXPPXXXXXXRPR 296
PP P P G P P P P P ++ P P+
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.44
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +3
Query: 159 AXPPXXPRPXPXXGPXPXPXPXPA-PXPASPXXSXXPP 269
A PP P P P P P A P PA P + PP
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +2
Query: 167 PXXPSPPXXXGPXPXXPXXPCPXARXPPXLPPPPXXXXXXPP 292
P +PP P P P P PP PP P PP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVP---PPPSAPPMPAGPPSAPP 1732
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 129 SPXXXLAXXPAXPPXXPRPXPXXGPXPXPXP--XPAPXPASPXXSXXPP 269
+P A P PP P P P P P P P PAS S P
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 25.8 bits (54), Expect = 9.4
Identities = 15/55 (27%), Positives = 15/55 (27%), Gaps = 1/55 (1%)
Frame = +3
Query: 156 PAXPPXXPRPXPXXGPXPXPXPXPAPXPAS-PXXSXXPPXXXXXXRPRXXLXGTP 317
P P P P P P P P P S P PP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.5 bits (63), Expect = 0.76
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -1
Query: 269 GGXXGGXGGXGRGGRXGXGXXXXARXGXGARXPXGXXGXXGQGGXRGXXXGXXG 108
GG GG GG GGR G G G G G G+GG G G G
Sbjct: 12 GGSRGGRGGFN-GGRGGFGGGRGGARGGGRGGARG-----GRGGRGGARGGRGG 59
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 118 PXXXPLXPPWPXXPXXPXGXLAPXPXRAXXXXPXPXLPPRPXPPXP 255
P PL P P P + P P + P P LP PP P
Sbjct: 991 PPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVP-LPSADAPPIP 1035
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Frame = +3
Query: 132 PXXXLAXXPAXPPXX--PRPXPXXGPXPXPXPXPAPXPASPXXSXXP 266
P P PP P P P G P P P AP +P P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 129 SPXXXLAXXPAXPPXXPR--PXPXXGPXPXPXPXPAPXPASPXXSXXPP 269
SP LA P P + P P P P P+ P P + PP
Sbjct: 1003 SPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPP 1051
Score = 26.6 bits (56), Expect = 5.4
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = +3
Query: 132 PXXXLAXXPAXPPXX--PRPXPXXGPXPXPXP----XPAPXPASPXXSXXPP 269
P + P PP P P P G P P P P P P+S S P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 25.8 bits (54), Expect = 9.4
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 167 PXXPSPPXXXGPXPXXPXXPCPXARXPPXLPPPPXXXXXXPPXTXFXGDP 316
P P P P P P P P PP P PP G P
Sbjct: 1092 PPVPKPSVAAPPVPK-PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/46 (28%), Positives = 15/46 (32%)
Frame = +3
Query: 132 PXXXLAXXPAXPPXXPRPXPXXGPXPXPXPXPAPXPASPXXSXXPP 269
P +A P P P P P P P+ P P S P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/45 (28%), Positives = 15/45 (33%)
Frame = +3
Query: 132 PXXXLAXXPAXPPXXPRPXPXXGPXPXPXPXPAPXPASPXXSXXP 266
P + PA P P P P P P AP P + P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Score = 25.8 bits (54), Expect = 9.4
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 3/48 (6%)
Frame = +3
Query: 132 PXXXLAXXPAXPPXX---PRPXPXXGPXPXPXPXPAPXPASPXXSXXP 266
P +A P P P P P G P P P AP P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = +2
Query: 176 PSPPXXXGPXPXXPXXPCPXARXPPXLPPPPXXXXXXPP 292
P PP P P P P PP P PP
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = +1
Query: 130 PLXPPWPXXPXX--PXGXLAPXPXRAXXXXPXPXLPPRPXPPXP 255
P PP P P P P P P P PP P P P
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +3
Query: 156 PAXPPXXPRPXPXXGPXPXPXPXPAPXPASPXXSXXPP 269
P+ PP P P P P P PA P P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = +2
Query: 167 PXXPSPPXXXGPXPXXPXXPCPXARXPPXLPPPP 268
P P P P P PP +PPPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/49 (26%), Positives = 16/49 (32%)
Frame = +1
Query: 103 SXPXXPXXXPLXPPWPXXPXXPXGXLAPXPXRAXXXXPXPXLPPRPXPP 249
S P P P P P P + P P +PP+ PP
Sbjct: 156 SAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 165 PPXXPRPXPXXGPXPXPXPXPAPXPAS 245
PP P P P P P P P P+S
Sbjct: 589 PPRVPTPVPGRTLSPKPTRIPTPIPSS 615
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 144 LAXXPAXPPXXPRPXPXXGPXPXPXPXPAP 233
+A P P P P P P P P P P
Sbjct: 1 MASLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 7.1
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Frame = -3
Query: 336 GGXXXKKGSPXKXVXG-GXXXXXXGGGGRXGGXRAXGQGXXGXXGXGPXXXGGEGXXG 166
GG G P G G G G GG G G G G GG G G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
>SPBC1703.01c ||SPBP4H10.22c|RNase P and RNase MRP
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 26.2 bits (55), Expect = 7.1
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -2
Query: 100 IKQICIHFELYQVSLLKTEYQILRIP 23
++ ICIH + +SL+ E +++R+P
Sbjct: 146 LEGICIHESKHMLSLITKENRVVRVP 171
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 144 LAXXPAXPPXXPRPXPXXGPXPXPXPXPAPXPASP 248
L+ A PP P P GP P P A PA P
Sbjct: 1876 LSNQAAPPPPPPMALPKAGP-PSAAPTSALPPAGP 1909
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 182 PPXXXGPXPXXPXXPCPXARXPPXLPPPP 268
PP P P P PP PPPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,296,310
Number of Sequences: 5004
Number of extensions: 31691
Number of successful extensions: 250
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 507285244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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